RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 OR14A16Q8NHC5 309 aa4.29□□□□□ -1.72
EDEM3-203ENST00000439962 SMPDL3BQ92485 455 aa4.29□□□□□ -1.72
EDEM3-203ENST00000439962 PNPLA2Q96AD5 504 aa4.29□□□□□ -1.72
EDEM3-203ENST00000439962 ART5Q96L15 291 aa4.29□□□□□ -1.72
EDEM3-203ENST00000439962 VSTM2LQ96N03 204 aa4.29□□□□□ -1.72
EDEM3-203ENST00000439962 NMNAT2Q9BZQ4 307 aa4.29□□□□□ -1.72
EDEM3-203ENST00000439962 RNF32Q9H0A6 362 aa4.29□□□□□ -1.72
EDEM3-203ENST00000439962 POLE4Q9NR33 117 aa4.29□□□□□ -1.72
EDEM3-203ENST00000439962 DEPPQ9NTK1 212 aa4.29□□□□□ -1.72
EDEM3-203ENST00000439962 ING3Q9NXR8 418 aa4.29□□□□□ -1.72
EDEM3-203ENST00000439962 ABI3Q9P2A4 366 aa4.29□□□□□ -1.72
EDEM3-203ENST00000439962 MYOTQ9UBF9 498 aa4.29□□□□□ -1.72
EDEM3-203ENST00000439962 ERRFI1Q9UJM3 462 aaPredicted RBP4.29□□□□□ -1.72
EDEM3-203ENST00000439962 PCDHGA9Q9Y5G4 932 aaKnown RBP4.29□□□□□ -1.72
EDEM3-203ENST00000439962 NAV3Q8IVL0 2385 aa4.29□□□□□ -1.72
EDEM3-203ENST00000439962 PCNX3Q9H6A9 2034 aa4.29□□□□□ -1.72
EDEM3-203ENST00000439962 ARID1AO14497 2285 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 NPIPA5A0A0B4J1W7 369 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 TRAV17A0A0B4J275 112 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 A0A1B0GTH9 108 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 A0A1W2PQD3 144 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 C7orf66A4D0T2 115 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 CYSRT1A8MQ03 144 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 NOTOA8MTQ0 251 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 FAM47E-STBD1D6RA91 191 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 NPIPA7E9PJI5 369 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 CDC42EP2O14613 210 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 PLA2G10O15496 165 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 NEURL1O76050 574 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 ZFAND5O76080 213 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 DDAH2O95865 285 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 IGHEP01854 428 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 UCHL1P09936 223 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 NPIPA8P0DM63 369 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 CD46P15529 392 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 CELP19835 753 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 MAKP20794 623 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 MAPK3P27361 379 aaPredicted RBP4.28□□□□□ -1.72
EDEM3-203ENST00000439962 PITPNBP48739 271 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 MEOX1P50221 254 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 EFR3AQ14156 821 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 ELAVL1Q15717 326 aaKnown RBP4.28□□□□□ -1.72
EDEM3-203ENST00000439962 EXT1Q16394 746 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 FAM69AQ5T7M9 428 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 SLC22A10Q63ZE4 541 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 TMEM53Q6P2H8 277 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF585AQ6P3V2 769 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 FIGNL1Q6PIW4 674 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 NOXA1Q86UR1 476 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 PLPP5Q8NEB5 264 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 C17orf47Q8NEP4 570 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 C16orf52Q8NHV5 167 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 ASB13Q8WXK3 278 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 SMIM19Q96E16 107 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 SGTBQ96EQ0 304 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 RADILQ96JH8 1075 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 CNN2Q99439 309 aaKnown RBP4.28□□□□□ -1.72
EDEM3-203ENST00000439962 TIMP4Q99727 224 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 TM9SF2Q99805 663 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 C11orf54Q9H0W9 315 aaPredicted RBP4.28□□□□□ -1.72
EDEM3-203ENST00000439962 NXF5Q9H1B4 397 aaKnown RBP4.28□□□□□ -1.72
EDEM3-203ENST00000439962 OR10A5Q9H207 317 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 KLRF1Q9NZS2 232 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 RPS6KB2Q9UBS0 482 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 CAMK2AQ9UQM7 478 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 NUBP2Q9Y5Y2 271 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 ETV7Q9Y603 341 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 USF3Q68DE3 2245 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 MED13LQ71F56 2210 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 RTTNQ86VV8 2226 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 A0A1B0GWA3 101 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 SHISA8B8ZZ34 492 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 PRAF2O60831 178 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 OR7A10O76100 309 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 ECDO95905 644 aaPredicted RBP4.28□□□□□ -1.72
EDEM3-203ENST00000439962 RAF1P04049 648 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 CYC1P08574 325 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 TACSTD2P09758 323 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 RFPL3SP0C7P2 107 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 CALCBP10092 127 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 SLC6A1P30531 599 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 GABRA3P34903 492 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 THBS2P35442 1172 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 INPP1P49441 399 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 DIO1P49895 249 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 EMDP50402 254 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 FOXK1P85037 733 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 PSG6Q00889 435 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 FHL1Q13642 323 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 CDK5R1Q15078 307 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 GPR68Q15743 365 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 YIF1BQ5BJH7 314 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF362Q5T0B9 420 aaPredicted RBP4.28□□□□□ -1.72
EDEM3-203ENST00000439962 FNDC7Q5VTL7 733 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 GPR139Q6DWJ6 353 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 WBP2NLQ6ICG8 309 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 PLBD1Q6P4A8 553 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 ZNF782Q6ZMW2 699 aaPredicted RBP4.28□□□□□ -1.72
EDEM3-203ENST00000439962 Q6ZS92 163 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 KLBQ86Z14 1044 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms