RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 CSNK1A1P48729 337 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 ZNF83P51522 516 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 RAD23AP54725 363 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 NR1H2P55055 460 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 ADAM8P78325 824 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 TOP3AQ13472 1001 aaPredicted RBP15.47■□□□□ 0.07
CCDC188-201ENST00000439765 FHL1Q13642 323 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 RFX4Q33E94 735 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 ANKDD1AQ495B1 522 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 ZNF704Q6ZNC4 412 aaPredicted RBP15.47■□□□□ 0.07
CCDC188-201ENST00000439765 IGFN1Q86VF2 1251 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 C17orf78Q8N4C9 275 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 OR51A7Q8NH64 312 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 ADAD1Q96M93 576 aaKnown RBP15.47■□□□□ 0.07
CCDC188-201ENST00000439765 C1QTNF6Q9BXI9 259 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 ULBP2Q9BZM5 246 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 ESRP2Q9H6T0 727 aaKnown RBP15.47■□□□□ 0.07
CCDC188-201ENST00000439765 DLL4Q9NR61 685 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 SLC17A5Q9NRA2 495 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 INIPQ9NRY2 104 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 IL20Q9NYY1 176 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 HIF3AQ9Y2N7 669 aa15.47■□□□□ 0.07
CCDC188-201ENST00000439765 HEATR1Q9H583 2144 aaKnown RBP15.47■□□□□ 0.07
CCDC188-201ENST00000439765 NSD1Q96L73 2696 aaPredicted RBP15.47■□□□□ 0.07
CCDC188-201ENST00000439765 USF3Q68DE3 2245 aa15.46■□□□□ 0.07
CCDC188-201ENST00000439765 BCL10O95999 233 aa15.46■□□□□ 0.07
CCDC188-201ENST00000439765 SH3BGRP55822 239 aaPredicted RBP15.46■□□□□ 0.07
CCDC188-201ENST00000439765 RPS4XP62701 263 aaKnown RBP15.46■□□□□ 0.07
CCDC188-201ENST00000439765 ARF1P84077 181 aaKnown RBP15.46■□□□□ 0.07
CCDC188-201ENST00000439765 TBRG1Q3YBR2 411 aa15.46■□□□□ 0.07
CCDC188-201ENST00000439765 ALG10Q5BKT4 473 aa15.46■□□□□ 0.07
CCDC188-201ENST00000439765 ADAM5Q6NVV9 412 aa15.46■□□□□ 0.07
CCDC188-201ENST00000439765 ZNF620Q6ZNG0 422 aa15.46■□□□□ 0.07
CCDC188-201ENST00000439765 CLDN22Q8N7P3 220 aa15.46■□□□□ 0.07
CCDC188-201ENST00000439765 WDR31Q8NA23 367 aa15.46■□□□□ 0.07
CCDC188-201ENST00000439765 OR6X1Q8NH79 312 aa15.46■□□□□ 0.07
CCDC188-201ENST00000439765 RDH12Q96NR8 316 aa15.46■□□□□ 0.07
CCDC188-201ENST00000439765 NELFAQ9H3P2 528 aa15.46■□□□□ 0.07
CCDC188-201ENST00000439765 B3GAT2Q9NPZ5 323 aa15.46■□□□□ 0.07
CCDC188-201ENST00000439765 SMPD3Q9NY59 655 aaPredicted RBP15.46■□□□□ 0.07
CCDC188-201ENST00000439765 ENOPH1Q9UHY7 261 aa15.46■□□□□ 0.07
CCDC188-201ENST00000439765 RNF115Q9Y4L5 304 aa15.46■□□□□ 0.07
CCDC188-201ENST00000439765 RPL36A-HNRNPH2H7BZ11 118 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 SNAP29O95721 258 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 IGFBP1P08833 259 aaPredicted RBP15.46■□□□□ 0.06
CCDC188-201ENST00000439765 DAP3P51398 398 aaKnown RBP15.46■□□□□ 0.06
CCDC188-201ENST00000439765 FXYD6P3P58550 94 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 PRPS1P60891 318 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 ESRRGP62508 458 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 TUBA1BP68363 451 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 TUBA4AP68366 448 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 RUNX1T1Q06455 604 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 ACKR1Q16570 336 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 ZIK1Q3SY52 487 aaPredicted RBP15.46■□□□□ 0.06
CCDC188-201ENST00000439765 NCMAPQ5T1S8 102 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 ANKRD16Q6P6B7 361 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 TUBA1AQ71U36 451 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 ASB10Q8WXI3 467 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 ZNF566Q969W8 418 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 SLC25A44Q96H78 314 aaPredicted RBP15.46■□□□□ 0.06
CCDC188-201ENST00000439765 OR52D1Q9H346 318 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 EGLN3Q9H6Z9 239 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 BEX4Q9NWD9 120 aaPredicted RBP15.46■□□□□ 0.06
CCDC188-201ENST00000439765 AMDHD2Q9Y303 409 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 CDH10Q9Y6N8 788 aa15.46■□□□□ 0.06
CCDC188-201ENST00000439765 VPS13CQ709C8 3753 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 DPRXA6NFQ7 191 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 ZNF99A8MXY4 864 aaPredicted RBP15.45■□□□□ 0.06
CCDC188-201ENST00000439765 M0R1B8 84 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 SOX14O95416 240 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 CD3EP07766 207 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 PGA4P0DJD7 388 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 PGA3P0DJD8 388 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 FOSL1P15407 271 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 POLR2IP36954 125 aaKnown RBP15.45■□□□□ 0.06
CCDC188-201ENST00000439765 CRISP1P54107 249 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 AQP4P55087 323 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 SPOCK1Q08629 439 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 NPRL3Q12980 569 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 SLC36A3Q495N2 470 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 RPL13AP3Q6NVV1 102 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 SMARCD3Q6STE5 483 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 SSX8Q7RTT4 187 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 KBTBD8Q8NFY9 601 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 FANK1Q8TC84 345 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 BCL2L2Q92843 193 aaPredicted RBP15.45■□□□□ 0.06
CCDC188-201ENST00000439765 LRR1Q96L50 414 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 SAMD8Q96LT4 415 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 GABARAPL3Q9BY60 117 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 PLA2G12AQ9BZM1 189 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 TOR3AQ9H497 397 aa15.45■□□□□ 0.06
CCDC188-201ENST00000439765 PLCE1Q9P212 2302 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 H3BN98 237 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 ABCD4O14678 606 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 NDUFB2O95178 105 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 IGHG1P01857 330 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 B4GALT1P15291 398 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 CLRN1P58418 232 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 UBE2NP61088 152 aaKnown RBP15.44■□□□□ 0.06
CCDC188-201ENST00000439765 TAF11Q15544 211 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms