RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 PSMD9O00233 223 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 TM4SF5O14894 197 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 OR2F2O95006 317 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 ZFPL1O95159 310 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 AGR2O95994 175 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 HIST1H1CP16403 213 aaKnown RBP7.78□□□□□ -1.16
HPS4-206ENST00000439453 ADRA2CP18825 462 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 GUCA2AQ02747 115 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 OR2F1Q13607 317 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 SNTB1Q13884 538 aaKnown RBP7.78□□□□□ -1.16
HPS4-206ENST00000439453 CEBPEQ15744 281 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 DUSP5Q16690 384 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 BEX5Q5H9J7 111 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 TBC1D3GQ6DHY5 549 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 OR2I1PQ8NGU4 316 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 THAP6Q8TBB0 222 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 RPS4Y2Q8TD47 263 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 WNT2BQ93097 391 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 RAB7BQ96AH8 199 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 MRPL48Q96GC5 212 aaKnown RBP7.78□□□□□ -1.16
HPS4-206ENST00000439453 BMFQ96LC9 184 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 SDF2Q99470 211 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 POFUT1Q9H488 388 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 GPN3Q9UHW5 284 aaPredicted RBP7.78□□□□□ -1.16
HPS4-206ENST00000439453 TNFSF18Q9UNG2 199 aa7.78□□□□□ -1.16
HPS4-206ENST00000439453 ARID1BQ8NFD5 2236 aaPredicted RBP7.78□□□□□ -1.16
HPS4-206ENST00000439453 A0A087WV48 116 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 OR5H14A6NHG9 310 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 VEGFDO43915 354 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 EIF3GO75821 320 aaKnown RBP eCLIP7.77□□□□□ -1.17
HPS4-206ENST00000439453 CD8AP01732 235 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 CRYBA1P05813 215 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 DCDP81605 110 aaKnown RBP7.77□□□□□ -1.17
HPS4-206ENST00000439453 ZNF345Q14585 488 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 AVPI1Q5T686 147 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 YOD1Q5VVQ6 348 aaPredicted RBP7.77□□□□□ -1.17
HPS4-206ENST00000439453 TMPRSS12Q86WS5 348 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 STEAP2Q8NFT2 490 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 NANPQ8TBE9 248 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 ALX4Q9H161 411 aaPredicted RBP7.77□□□□□ -1.17
HPS4-206ENST00000439453 C1orf198Q9H425 327 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 C14orf105Q9NVL8 296 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 SERTAD3Q9UJW9 196 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 FREM2Q5SZK8 3169 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 NPIPA5A0A0B4J1W7 369 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 MEIS3P1A6NDR6 274 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 OR2W5A6NFC9 320 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 IGLON5A6NGN9 336 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 LRRC72A6NJI9 287 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 NPIPA7E9PJI5 369 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 PMS2P2O95744 297 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 NPIPA8P0DM63 369 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 IGFALSP35858 605 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 DIO1P49895 249 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 PRDX1Q06830 199 aaKnown RBP7.77□□□□□ -1.17
HPS4-206ENST00000439453 PON3Q15166 354 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 PGAP1Q75T13 922 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 SLC35F3Q8IY50 421 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 ZNF619Q8N2I2 560 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 DMBX1Q8NFW5 382 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 OR2L5Q8NG80 312 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 GRHL3Q8TE85 626 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 CCDC107Q8WV48 283 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 ZNRF4Q8WWF5 429 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 DVL3Q92997 716 aaPredicted RBP7.77□□□□□ -1.17
HPS4-206ENST00000439453 COL26A1Q96A83 441 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 MBNL1Q9NR56 388 aaKnown RBP7.77□□□□□ -1.17
HPS4-206ENST00000439453 ZNF629Q9UEG4 869 aaPredicted RBP7.77□□□□□ -1.17
HPS4-206ENST00000439453 TBC1D3DA0A087WVF3 549 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 TBC1D3IA0A087WXS9 549 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 TBC1D3LB9A6J9 549 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 ITGB2P05107 769 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 DBIP07108 87 aaKnown RBP7.77□□□□□ -1.17
HPS4-206ENST00000439453 ACAA1P09110 424 aaPredicted RBP7.77□□□□□ -1.17
HPS4-206ENST00000439453 OR4E1P0C645 316 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 TBC1D3HP0C7X1 549 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 BLOC1S1P78537 153 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 TBC1D3CQ6IPX1 549 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 ZNF765Q7L2R6 523 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 TBC1D3Q8IZP1 549 aaPredicted RBP7.77□□□□□ -1.17
HPS4-206ENST00000439453 ZFP82Q8N141 532 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 OR8S1Q8NH09 359 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 PDCD10Q9BUL8 212 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 TM7SF3Q9NS93 570 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 ZFP57Q9NU63 452 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 MYEF2Q9P2K5 600 aaKnown RBP7.77□□□□□ -1.17
HPS4-206ENST00000439453 CHRNA9Q9UGM1 479 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 CEP250Q9BV73 2442 aa7.77□□□□□ -1.17
HPS4-206ENST00000439453 GGT3PA6NGU5 568 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 BCAT2O15382 392 aaPredicted RBP7.76□□□□□ -1.17
HPS4-206ENST00000439453 AKR7A3O95154 331 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 CD3DP04234 171 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 FABP1P07148 127 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 C6P13671 934 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 CSF2RBP32927 897 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 SOX2P48431 317 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 NR0B1P51843 470 aaKnown RBP7.76□□□□□ -1.17
HPS4-206ENST00000439453 FHL1Q13642 323 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 TAF13Q15543 124 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 TRIM61Q5EBN2 209 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms