RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 WBP4O75554 376 aaKnown RBP11.19□□□□□ -0.62
SCLT1-202ENST00000439369 UPK3AO75631 287 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 GLCEO94923 617 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 HRGP04196 525 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 CTLA4P16410 223 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 AGAP20933 346 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 GNLYP22749 145 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 MPGP29372 298 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 CHRNB4P30926 498 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 HTR1FP30939 366 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 LCN6P62502 163 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 MRPS34P82930 218 aaKnown RBP11.19□□□□□ -0.62
SCLT1-202ENST00000439369 ROR2Q01974 943 aaKnown RBP11.19□□□□□ -0.62
SCLT1-202ENST00000439369 POU4F2Q12837 409 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 CDK5R2Q13319 367 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 KCNMB1Q16558 191 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 SLC25A35Q3KQZ1 300 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 VWA1Q6PCB0 445 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 MEPCEQ7L2J0 689 aaKnown RBP11.19□□□□□ -0.62
SCLT1-202ENST00000439369 GLB1L2Q8IW92 636 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 OR6V1Q8N148 313 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 UBE2J2Q8N2K1 259 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 PROKR2Q8NFJ6 384 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 UBE2FQ969M7 185 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 CNBD2Q96M20 576 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 YTHDF1Q9BYJ9 559 aaKnown RBP11.19□□□□□ -0.62
SCLT1-202ENST00000439369 C12orf49Q9H741 205 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 GPR35Q9HC97 309 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 JKAMPQ9P055 326 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 KCNG2Q9UJ96 466 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 NBEAQ8NFP9 2946 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 POLEQ07864 2286 aa11.19□□□□□ -0.62
SCLT1-202ENST00000439369 ZGRF1Q86YA3 2104 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 IRGMA1A4Y4 181 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 ZNF99A8MXY4 864 aaPredicted RBP11.18□□□□□ -0.62
SCLT1-202ENST00000439369 ENTPD6O75354 484 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 CCDC159P0C7I6 412 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 NPR2P20594 1047 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 COX5AP20674 150 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 LAP3P28838 519 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 FMO3P31513 532 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 GUCA1AP43080 201 aaPredicted RBP11.18□□□□□ -0.62
SCLT1-202ENST00000439369 CDH11P55287 796 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 TGFBR3Q03167 851 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 FMODQ06828 376 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 APOFQ13790 326 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 GGTLC2Q14390 218 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 IGFBP7Q16270 282 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 PHYHD1Q5SRE7 291 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 C6orf141Q5SZD1 244 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 GABRG1Q8N1C3 465 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 C1orf162Q8NEQ5 155 aaPredicted RBP11.18□□□□□ -0.62
SCLT1-202ENST00000439369 OR9Q1Q8NGQ5 310 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 APH1BQ8WW43 257 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 OTULINQ96BN8 352 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 ALKBH3Q96Q83 286 aaPredicted RBP11.18□□□□□ -0.62
SCLT1-202ENST00000439369 TEAD3Q99594 435 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 USB1Q9BQ65 265 aaKnown RBP11.18□□□□□ -0.62
SCLT1-202ENST00000439369 WACQ9BTA9 647 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 HCAR1Q9BXC0 346 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 MED20Q9H944 212 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 MARCH7Q9H992 704 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 CRLF2Q9HC73 371 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 SRA1Q9HD15 236 aaKnown RBP11.18□□□□□ -0.62
SCLT1-202ENST00000439369 MRPS18AQ9NVS2 196 aaKnown RBP11.18□□□□□ -0.62
SCLT1-202ENST00000439369 TAS2R16Q9NYV7 291 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 DNAJC27Q9NZQ0 273 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 PRSS50Q9UI38 385 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 ERRFI1Q9UJM3 462 aaPredicted RBP11.18□□□□□ -0.62
SCLT1-202ENST00000439369 RPL36Q9Y3U8 105 aaKnown RBP11.18□□□□□ -0.62
SCLT1-202ENST00000439369 UGT2A1Q9Y4X1 527 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 MED12LQ86YW9 2145 aa11.18□□□□□ -0.62
SCLT1-202ENST00000439369 CCDC182A6NF36 153 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 A8MXE2 369 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 DCTN6O00399 190 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 LRRTM2O43300 516 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 SMNDC1O75940 238 aaKnown RBP eCLIP11.17□□□□□ -0.62
SCLT1-202ENST00000439369 HOXB1P14653 301 aaPredicted RBP11.17□□□□□ -0.62
SCLT1-202ENST00000439369 EDNRAP25101 427 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 MTNR1AP48039 350 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 HSF2Q03933 536 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 FAPQ12884 760 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 CEACAM16Q2WEN9 425 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 FBXL19-AS1Q494R0 122 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 TEX30Q5JUR7 227 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 RBM48Q5RL73 367 aaKnown RBP11.17□□□□□ -0.62
SCLT1-202ENST00000439369 LINC01590Q5TEZ4 76 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 LINGO2Q7L985 606 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 DPPA2Q7Z7J5 298 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 FJX1Q86VR8 437 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 CCDC36Q8IYA8 594 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 ZNF610Q8N9Z0 462 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 BBS1Q8NFJ9 593 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 SLC26A10Q8NG04 563 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 PRR7Q8TB68 274 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 CNIH3Q8TBE1 160 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 CCDC120Q96HB5 630 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 TSSK2Q96PF2 358 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 MNTQ99583 582 aa11.17□□□□□ -0.62
SCLT1-202ENST00000439369 HDHD5Q9BXW7 423 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms