RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SFXN1Q9H9B4 322 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 GHRLQ9UBU3 117 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 DPP7Q9UHL4 492 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 GPR34Q9UPC5 381 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-204ENST00000438964 A0A1B0GV50 99 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 MED19A0JLT2 244 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-204ENST00000438964 OTOL1A6NHN0 477 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-204ENST00000438964 METTL12A8MUP2 240 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 ZNF749O43361 778 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 NDUFB2O95178 105 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 DBIP07108 87 aaKnown RBP12.15□□□□□ -0.46
ACTN1-204ENST00000438964 PSMD4P55036 377 aaKnown RBP12.15□□□□□ -0.46
ACTN1-204ENST00000438964 FAM220AQ7Z4H9 259 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 NRSN1Q8IZ57 195 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 CLEC1AQ8NC01 280 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 DCUN1D4Q92564 292 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 NR4A3Q92570 626 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 ZBTB8AQ96BR9 441 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 ZNF558Q96NG5 402 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 CLCC1Q96S66 551 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 ZNF350Q9GZX5 532 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 COL4A6Q14031 1691 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 A0A0B4J2E0 115 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 A0A1B0GX12 115 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 POM121BA6NF01 834 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 SSX5O60225 188 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 WNT11O96014 354 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 HLA-DQA2P01906 255 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 S100A6P06703 90 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 TRA2BP62995 288 aaKnown RBP12.14□□□□□ -0.47
ACTN1-204ENST00000438964 POU4F2Q12837 409 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 ALKBH1Q13686 389 aaKnown RBP12.14□□□□□ -0.47
ACTN1-204ENST00000438964 HABP2Q14520 560 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-204ENST00000438964 ZIC1Q15915 447 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 NKAPLQ5M9Q1 402 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 ANKRD33Q7Z3H0 272 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 VN1R4Q7Z5H5 301 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 NAA40Q86UY6 237 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 SLC35F3Q8IY50 421 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 INO80EQ8NBZ0 244 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-204ENST00000438964 ADAD2Q8NCV1 583 aaKnown RBP12.14□□□□□ -0.47
ACTN1-204ENST00000438964 OR10G6Q8NH81 332 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 CCDC74AQ96AQ1 378 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 FAM3DQ96BQ1 224 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 ZNF514Q96K75 400 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-204ENST00000438964 UTP23Q9BRU9 249 aaKnown RBP12.14□□□□□ -0.47
ACTN1-204ENST00000438964 LAT2Q9GZY6 243 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 ZNF275Q9NSD4 429 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-204ENST00000438964 HAO2Q9NYQ3 351 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 MSRAQ9UJ68 235 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 ICAM5Q9UMF0 924 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 VSIG4Q9Y279 399 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 A0A0D9SG52 128 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 C17orf51A8MQB3 221 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 SULT2B1O00204 365 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 SULT1B1O43704 296 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 ERGP11308 486 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 VIPR2P41587 438 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 OR2B8PP59922 312 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 DEFB103AP81534 67 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 SMCO1Q147U7 214 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 CDNFQ49AH0 187 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 TMEM35AQ53FP2 167 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 PRAMEF8Q5VWM4 474 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 PRAMEF7Q5VXH5 474 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 ZNF600Q6ZNG1 722 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 CCDC36Q8IYA8 594 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 RNF113BQ8IZP6 322 aaKnown RBP12.14□□□□□ -0.47
ACTN1-204ENST00000438964 SEMA6DQ8NFY4 1073 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 OR51A2Q8NGJ7 313 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 OR5M8Q8NGP6 311 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 ZC3H10Q96K80 434 aaKnown RBP12.14□□□□□ -0.47
ACTN1-204ENST00000438964 LINC00615Q96LM1 132 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-204ENST00000438964 ZFP57Q9NU63 452 aa12.14□□□□□ -0.47
ACTN1-204ENST00000438964 MSGN1A6NI15 193 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 RNGTTO60942 597 aaKnown RBP12.13□□□□□ -0.47
ACTN1-204ENST00000438964 UPK3AO75631 287 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 EML2O95834 649 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 PVRP15151 417 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 CD1CP29017 333 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 KRBOX4Q5JUW0 171 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 RRNAD1Q96FB5 475 aaKnown RBP12.13□□□□□ -0.47
ACTN1-204ENST00000438964 CMKLR1Q99788 373 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 WDR77Q9BQA1 342 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-204ENST00000438964 PRMT8Q9NR22 394 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-204ENST00000438964 KCNK7Q9Y2U2 307 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 CSAG2Q9Y5P2 127 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 MED12Q93074 2177 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 ARHGEF17Q96PE2 2063 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-204ENST00000438964 C9JQL5 133 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 HOXA2O43364 376 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 SERPINA5P05154 406 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 CALCBP10092 127 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 MUC1P15941 1255 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-204ENST00000438964 SDHAP31040 664 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 HAAOP46952 286 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 F2RL1P55085 397 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 CXADRP78310 365 aa12.13□□□□□ -0.47
ACTN1-204ENST00000438964 SPOCK1Q08629 439 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms