RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 GANQ9H2C0 597 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 RNF41Q9H4P4 317 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 SH2D2AQ9NP31 389 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 PLEK2Q9NYT0 353 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 TRIM10Q9UDY6 481 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 SUN2Q9UH99 717 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 TRMT6Q9UJA5 497 aaKnown RBP1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 MRPS2Q9Y399 296 aaKnown RBP1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 ATP6V1DQ9Y5K8 247 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 TEX264Q9Y6I9 313 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 CLCA3PQ9Y6N3 262 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 MDN1Q9NU22 5596 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 IGLV8-61A0A075B6I0 122 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 ATP6AP2A0A1C7CYW4 349 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 FAM230AA0A1W2PPH8 454 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 LRP5LA4QPB2 252 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 F8WDY8 70 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 H0YIV9 168 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 BOLA2-SMG1P6H3BVE0 249 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 M0QX08 132 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 SLC28A1O00337 649 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 PES1O00541 588 aaKnown RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 CLDN3O15551 220 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 PSMD3O43242 534 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 PFKFB2O60825 505 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 SERF1AO75920 110 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 GOT2P00505 430 aaKnown RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 IFNB1P01574 187 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 IL1BP01584 269 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 CSF3P09919 207 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 RHOXF2BP0C7M4 288 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 PSG2P11465 335 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 PSMB1P20618 241 aaKnown RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 SYT1P21579 422 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 AHCYP23526 432 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 GJB2P29033 226 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 KCNJ1P48048 391 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 SSTP61278 116 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 ELP6Q0PNE2 266 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 IL24Q13007 206 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 MXD4Q14582 209 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 PDK1Q15118 436 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 SPHARQ15513 63 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 ZKSCAN8Q15776 578 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 STX1AQ16623 288 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 UNC50Q53HI1 259 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 ACER2Q5QJU3 275 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 SAXO2Q658L1 398 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 SPECC1LQ69YQ0 1117 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 CAPN13Q6MZZ7 669 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 ZSCAN25Q6NSZ9 544 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 FAHD2BQ6P2I3 314 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 BLOC1S2Q6QNY1 142 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 TMEM270Q6UE05 265 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 CWC27Q6UX04 472 aaKnown RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 ZYG11AQ6WRX3 759 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 BHLHA15Q7RTS1 189 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 TAF8Q7Z7C8 310 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 IQCF2Q8IXL9 164 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 ELMOD2Q8IZ81 293 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 H1FOOQ8IZA3 346 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 SFRP1Q8N474 314 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 FAM184AQ8NB25 1140 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 CCDC148Q8NFR7 591 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 OR56B2PQ8NGI1 322 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 OR52M1Q8NGK5 317 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 OR6M1Q8NGM8 313 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 OR10G6Q8NH81 332 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 RNF139Q8WU17 664 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 RAB7BQ96AH8 199 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 RAB3CQ96E17 227 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 CCDC51Q96ER9 411 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 FAHD2AQ96GK7 314 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 PCED1BQ96HM7 432 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 GPA33Q99795 319 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 RHOXF2Q9BQY4 288 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 SLC25A39Q9BZJ4 359 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 CXCL16Q9H2A7 254 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 DPH5Q9H2P9 285 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 BOLA2Q9H3K6 86 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 ZSCAN16Q9H4T2 348 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 LY9Q9HBG7 655 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 SYTL2Q9HCH5 934 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 DNAJC11Q9NVH1 559 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 GPATCH2LQ9NWQ4 482 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 CGNQ9P2M7 1197 aaKnown RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 WRAP73Q9P2S5 460 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 SEC14L4Q9UDX3 406 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 TMED5Q9Y3A6 229 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 CHTOPQ9Y3Y2 248 aaKnown RBP1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 MAB21L2Q9Y586 359 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 ATP8B3O60423 1300 aa1.66□□□□□ -2.14
HMGB1P18-201ENST00000438801 KIAA1549Q9HCM3 1950 aa1.65□□□□□ -2.14
HMGB1P18-201ENST00000438801 IGLV3-16A0A075B6K0 115 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 A0A0D9SFI3 127 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 A0A1W2PP18 115 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 H0YC42 278 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 H0YCG3 227 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 EEF2KO00418 725 aaKnown RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 SSX5O60225 188 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms