RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 RPL4P36578 427 aaKnown RBP21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 ACVR1BP36896 505 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 SERPINF1P36955 418 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 SNRPD2P62316 118 aaKnown RBP21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 SLC36A2Q495M3 483 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 MTX3Q5HYI7 312 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 VHLLQ6RSH7 139 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 IGFN1Q86VF2 1251 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 OR4K5Q8NGD3 323 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 FAM46AQ96IP4 442 aaKnown RBP21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 ZNF75AQ96N20 296 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 RBP7Q96R05 134 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 MUC13Q9H3R2 512 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 NOX3Q9HBY0 568 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 ACTR3BQ9P1U1 418 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 GDF2Q9UK05 429 aaPredicted RBP21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 FBXO9Q9UK97 447 aaPredicted RBP21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 SPEF1Q9Y4P9 236 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 TRBV4-1A0A0J9YWV2 114 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 B9A039 149 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 NPR2P20594 1047 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 SPIBQ01892 262 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 HGFACQ04756 655 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 FHL1Q13642 323 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 SWI5Q1ZZU3 235 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 IQCCQ4KMZ1 466 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 THEM4Q5T1C6 240 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 TMEM53Q6P2H8 277 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 SLC16A14Q7RTX9 510 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 OR52J3Q8NH60 311 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 MS4A3Q96HJ5 214 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 TSPAN32Q96QS1 320 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 SH3GL3Q99963 347 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 KCNN2Q9H2S1 579 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 IL1RAPQ9NPH3 570 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 AURKCQ9UQB9 309 aa21.43■■□□□ 1.02
RAPGEF1-206ENST00000438647 NDUFS7O75251 213 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 GADD45GO95257 159 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 SLC2A10O95528 541 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 CD14P08571 375 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 OR4A8P0C604 315 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 NUDT6P53370 316 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 RIPPLY3P57055 190 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 MRPS34P82930 218 aaKnown RBP21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 DAG1Q14118 895 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 EFNB3Q15768 340 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 ADIPOQQ15848 244 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 ARIH2OSQ8N7S6 290 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 ZNF519Q8TB69 540 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 NMD3Q96D46 503 aaKnown RBP21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 C1orf198Q9H425 327 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 RNF121Q9H920 327 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 SIAEQ9HAT2 523 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 GRHPRQ9UBQ7 328 aa21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 PRPF19Q9UMS4 504 aaKnown RBP21.42■■□□□ 1.02
RAPGEF1-206ENST00000438647 ZFHX3Q15911 3703 aa21.41■■□□□ 1.02
RAPGEF1-206ENST00000438647 NDUFB2O95178 105 aa21.41■■□□□ 1.02
RAPGEF1-206ENST00000438647 PTHP01270 115 aa21.41■■□□□ 1.02
RAPGEF1-206ENST00000438647 SERPINA5P05154 406 aa21.41■■□□□ 1.02
RAPGEF1-206ENST00000438647 GUCA1AP43080 201 aaPredicted RBP21.41■■□□□ 1.02
RAPGEF1-206ENST00000438647 OMPP47874 163 aa21.41■■□□□ 1.02
RAPGEF1-206ENST00000438647 LIMS1P48059 325 aa21.41■■□□□ 1.02
RAPGEF1-206ENST00000438647 GALK2Q01415 458 aa21.41■■□□□ 1.02
RAPGEF1-206ENST00000438647 SNTB2Q13425 540 aaKnown RBP21.41■■□□□ 1.02
RAPGEF1-206ENST00000438647 CIARTQ8N365 385 aaPredicted RBP21.41■■□□□ 1.02
RAPGEF1-206ENST00000438647 BCAS4Q8TDM0 211 aa21.41■■□□□ 1.02
RAPGEF1-206ENST00000438647 SIGLEC7Q9Y286 467 aa21.41■■□□□ 1.02
RAPGEF1-206ENST00000438647 SH3PXD2BA1X283 911 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 XKRYO14609 159 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 SSX4O60224 188 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 PATE4P0C8F1 98 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 NR4A1P22736 598 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 THBS4P35443 961 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 ERVK-25P63136 954 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 FMODQ06828 376 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 TNK1Q13470 666 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 RAB39AQ14964 217 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 SEC23BQ15437 767 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 MST1LQ2TV78 715 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 KRT80Q6KB66 452 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 SLC25A47Q6Q0C1 308 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 CYP2R1Q6VVX0 501 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 ZDHHC21Q8IVQ6 265 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 NSMAFQ92636 917 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 POP5Q969H6 163 aaKnown RBP21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 RSRC1Q96IZ7 334 aaKnown RBP21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 FUZQ9BT04 418 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 C1orf21Q9H246 121 aa21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 GSX1Q9H4S2 264 aaPredicted RBP21.4■■□□□ 1.02
RAPGEF1-206ENST00000438647 SMAD7O15105 426 aaKnown RBP21.39■■□□□ 1.01
RAPGEF1-206ENST00000438647 AHCYL1O43865 530 aa21.39■■□□□ 1.01
RAPGEF1-206ENST00000438647 T-ENOLP0DO92 83 aa21.39■■□□□ 1.01
RAPGEF1-206ENST00000438647 ZNF35P13682 527 aa21.39■■□□□ 1.01
RAPGEF1-206ENST00000438647 IFNGR2P38484 337 aa21.39■■□□□ 1.01
RAPGEF1-206ENST00000438647 DSCR9P59020 149 aa21.39■■□□□ 1.01
RAPGEF1-206ENST00000438647 PLP2Q04941 152 aa21.39■■□□□ 1.01
RAPGEF1-206ENST00000438647 RINLQ6ZS11 566 aa21.39■■□□□ 1.01
RAPGEF1-206ENST00000438647 FGFBP3Q8TAT2 258 aa21.39■■□□□ 1.01
RAPGEF1-206ENST00000438647 ZNF570Q96NI8 536 aa21.39■■□□□ 1.01
RAPGEF1-206ENST00000438647 TMCC3Q9ULS5 477 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms