RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 ZNF627Q7L945 461 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 DHDDSQ86SQ9 333 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 PATL1Q86TB9 770 aaKnown RBP6.67□□□□□ -1.34
VPS50-204ENST00000438395 SLC30A8Q8IWU4 369 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 SLC30A7Q8NEW0 376 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 OR1J2Q8NGS2 313 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 OR6X1Q8NH79 312 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 VANGL1Q8TAA9 524 aaPredicted RBP6.67□□□□□ -1.34
VPS50-204ENST00000438395 C11orf40Q8WZ69 217 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 TMEM186Q96B77 213 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 TLCD1Q96CP7 247 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 RAB39BQ96DA2 213 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 TIMD4Q96H15 378 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 SLC25A44Q96H78 314 aaPredicted RBP6.67□□□□□ -1.34
VPS50-204ENST00000438395 TXNDC15Q96J42 360 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 MPP4Q96JB8 637 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 SOX7Q9BT81 388 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 CCDC28BQ9BUN5 200 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 KCNN2Q9H2S1 579 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 OR51B6Q9H340 312 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 ZNF385DQ9H6B1 395 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 HINT3Q9NQE9 182 aaKnown RBP6.67□□□□□ -1.34
VPS50-204ENST00000438395 HIF1ANQ9NWT6 349 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 B3GNT2Q9NY97 397 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 SLCO1C1Q9NYB5 712 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 TREM2Q9NZC2 230 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 GLTPQ9NZD2 209 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 VAPAQ9P0L0 249 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 LEF1Q9UJU2 399 aaPredicted RBP6.67□□□□□ -1.34
VPS50-204ENST00000438395 A0A0A6YYJ9 748 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 TRAV20A0A0B4J274 112 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 TMEM238LA0A1B0GVL6 79 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 A0A1W2PRG6 482 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 TMEM129A0AVI4 362 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 TRAPPC13A5PLN9 417 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 LRRN3E7EW58 273 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 CH25HO95992 272 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 BCL10O95999 233 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 HPXP02790 462 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 OPN1SWP03999 348 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 NAT2P11245 290 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 NR2C1P13056 603 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 ZNF35P13682 527 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 ANPEPP15144 967 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 HOXB9P17482 250 aaPredicted RBP6.66□□□□□ -1.34
VPS50-204ENST00000438395 GPX2P18283 190 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 APLNRP35414 380 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 RAD52P43351 418 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 ATP4BP51164 291 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 DAP3P51398 398 aaKnown RBP6.66□□□□□ -1.34
VPS50-204ENST00000438395 NFYCQ13952 458 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 MELKQ14680 651 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 ZNF74Q16587 644 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 ALKBH6Q3KRA9 238 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 MMEL1Q495T6 779 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 PAGE3Q5JUK9 113 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 FAHD2BQ6P2I3 314 aaPredicted RBP6.66□□□□□ -1.34
VPS50-204ENST00000438395 SLC16A14Q7RTX9 510 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 COMTD1Q86VU5 262 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 MSRB3Q8IXL7 192 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 SLC22A24Q8N4F4 322 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 RBM15BQ8NDT2 890 aaKnown RBP6.66□□□□□ -1.34
VPS50-204ENST00000438395 CPEB3Q8NE35 698 aaKnown RBP6.66□□□□□ -1.34
VPS50-204ENST00000438395 OR4K5Q8NGD3 323 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 CLDND2Q8NHS1 167 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 SYNPRQ8TBG9 265 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 RASSF5Q8WWW0 418 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 FAHD2AQ96GK7 314 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 LRRC37BQ96QE4 947 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 KRTAP4-12Q9BQ66 201 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 CPPED1Q9BRF8 314 aaPredicted RBP6.66□□□□□ -1.34
VPS50-204ENST00000438395 SLC19A3Q9BZV2 496 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 TMBIM4Q9HC24 238 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 CCNB1IP1Q9NPC3 277 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 SLCO1B3Q9NPD5 702 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 ZNF275Q9NSD4 429 aaPredicted RBP6.66□□□□□ -1.34
VPS50-204ENST00000438395 DECR2Q9NUI1 292 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 TMEM38BQ9NVV0 291 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 SLAMF8Q9P0V8 285 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 TAAR3PQ9P1P4 343 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 STX18Q9P2W9 335 aaKnown RBP6.66□□□□□ -1.34
VPS50-204ENST00000438395 ZNF229Q9UJW7 825 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 SLC7A7Q9UM01 511 aa6.66□□□□□ -1.34
VPS50-204ENST00000438395 A0A0G2JMP0 313 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 A0A0X1KG70 313 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 PLSCR5A0PG75 271 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 GMNCA6NCL1 334 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 CLDN25C9JDP6 229 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 BLOC1S5-TXNDC5H3BN57 136 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 DHHO43323 396 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 ZNF500O60304 480 aaPredicted RBP6.65□□□□□ -1.34
VPS50-204ENST00000438395 CDC14BO60729 498 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 MFN2O95140 757 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 QDPRP09417 244 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 PATE4P0C8F1 98 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 GAAP10253 952 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 CCNOP22674 350 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 GCH1P30793 250 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 IFNA8P32881 189 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 PCGF2P35227 344 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms