RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 NSMAFQ92636 917 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 RELTQ969Z4 430 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 SH2D2AQ9NP31 389 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 NOX4Q9NPH5 578 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 TCFL5Q9UL49 500 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 ARPC4-TTLL3A0A0A6YYG9 625 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 A0A1W2PPK0 400 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 SLC2A2P11168 524 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-216ENST00000437340 EPXP11678 715 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 NPR2P20594 1047 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 POU3F1Q03052 451 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-216ENST00000437340 RASGEF1BQ0VAM2 473 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 CDCP2Q5VXM1 449 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 OR2G2Q8NGZ5 317 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 HSD17B8Q92506 261 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 LIN37Q96GY3 246 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-216ENST00000437340 DERL3Q96Q80 235 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 SLCO1C1Q9NYB5 712 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 EXTL2Q9UBQ6 330 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 TMEM212A6NML5 194 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 RBMS1P29558 406 aaKnown RBP23.04■■□□□ 1.28
CPNE1-216ENST00000437340 ROM1Q03395 351 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 P2RY14Q15391 338 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 Q499Y3 187 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 KCTD18Q6PI47 426 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-216ENST00000437340 ZNF679Q8IYX0 411 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 SAMD12Q8N8I0 201 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 TRMT10AQ8TBZ6 339 aaKnown RBP23.04■■□□□ 1.28
CPNE1-216ENST00000437340 HDGFL3Q9Y3E1 203 aa23.04■■□□□ 1.28
CPNE1-216ENST00000437340 ALPK2Q86TB3 2170 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 WDFY3Q8IZQ1 3526 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 OR4C45A6NMZ5 311 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 PIN1P1O15428 100 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 PSKH1P11801 424 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 PTGS2P35354 604 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 RPS27P42677 84 aaKnown RBP23.03■■□□□ 1.28
CPNE1-216ENST00000437340 ADAM8P78325 824 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 TRIP6Q15654 476 aaKnown RBP23.03■■□□□ 1.28
CPNE1-216ENST00000437340 ETFDHQ16134 617 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 TRIQKQ629K1 86 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 PPP1R32Q7Z5V6 425 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 NRARPQ7Z6K4 114 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 DCBLD2Q96PD2 775 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 SLC22A4Q9H015 551 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 COMMD4Q9H0A8 199 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 TEKT2Q9UIF3 430 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 PCDHGA1Q9Y5H4 931 aa23.03■■□□□ 1.28
CPNE1-216ENST00000437340 TRBV5-5A0A0J9YX44 114 aa23.02■■□□□ 1.28
CPNE1-216ENST00000437340 JMJD7P0C870 316 aa23.02■■□□□ 1.28
CPNE1-216ENST00000437340 TCN2P20062 427 aa23.02■■□□□ 1.28
CPNE1-216ENST00000437340 RFX2P48378 723 aa23.02■■□□□ 1.28
CPNE1-216ENST00000437340 SSPNQ14714 243 aa23.02■■□□□ 1.28
CPNE1-216ENST00000437340 SLC17A1Q14916 467 aa23.02■■□□□ 1.28
CPNE1-216ENST00000437340 ZNF239Q16600 458 aaKnown RBP23.02■■□□□ 1.28
CPNE1-216ENST00000437340 SLC22A10Q63ZE4 541 aa23.02■■□□□ 1.28
CPNE1-216ENST00000437340 GTPBP8Q8N3Z3 284 aaPredicted RBP23.02■■□□□ 1.28
CPNE1-216ENST00000437340 TMEM156Q8N614 296 aa23.02■■□□□ 1.28
CPNE1-216ENST00000437340 ITPKCQ96DU7 683 aa23.02■■□□□ 1.28
CPNE1-216ENST00000437340 AMELYQ99218 206 aa23.02■■□□□ 1.28
CPNE1-216ENST00000437340 KCNJ15Q99712 375 aa23.02■■□□□ 1.28
CPNE1-216ENST00000437340 SPRY4Q9C004 299 aa23.02■■□□□ 1.28
CPNE1-216ENST00000437340 B3GAT1Q9P2W7 334 aa23.02■■□□□ 1.28
CPNE1-216ENST00000437340 PISDQ9UG56 409 aa23.02■■□□□ 1.28
CPNE1-216ENST00000437340 COA3Q9Y2R0 106 aaPredicted RBP23.02■■□□□ 1.28
CPNE1-216ENST00000437340 SNPHO15079 494 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 SPARCP09486 303 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 CCR9P51686 369 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 CHAF1BQ13112 559 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 MEP1BQ16820 701 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 DHRS13Q6UX07 377 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 NHLRC1Q6VVB1 395 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 TIPARPQ7Z3E1 657 aaKnown RBP23.01■■□□□ 1.27
CPNE1-216ENST00000437340 DEFB124Q8NES8 71 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 CT55Q8WUE5 264 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 THRSPQ92748 146 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 ELOVL3Q9HB03 270 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 HPF1Q9NWY4 346 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 MALT1Q9UDY8 824 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 ACOD1A6NK06 481 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 EIF4EP06730 217 aaKnown RBP23.01■■□□□ 1.27
CPNE1-216ENST00000437340 ATF1P18846 271 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 TAB1Q15750 504 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 TEX30Q5JUR7 227 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 GLRX5Q86SX6 157 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 C19orf18Q8NEA5 215 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 RNF128Q8TEB7 428 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 C4orf45Q96LM5 186 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 CMTM3Q96MX0 182 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 B3GAT2Q9NPZ5 323 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 KLHL13Q9P2N7 655 aa23.01■■□□□ 1.27
CPNE1-216ENST00000437340 ING1Q9UK53 422 aaPredicted RBP23.01■■□□□ 1.27
CPNE1-216ENST00000437340 FARSAQ9Y285 508 aaKnown RBP23.01■■□□□ 1.27
CPNE1-216ENST00000437340 AK6Q9Y3D8 172 aaKnown RBP23.01■■□□□ 1.27
CPNE1-216ENST00000437340 ZNF292O60281 2723 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 PMS2P1A4D2B8 440 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 BOLA2-SMG1P6H3BVE0 249 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 SSX4O60224 188 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 ZNF254O75437 659 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 KHDRBS3O75525 346 aaKnown RBP23■■□□□ 1.27
CPNE1-216ENST00000437340 HPP00738 406 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms