RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 THEM4Q5T1C6 240 aa13.5□□□□□ -0.25
CNOT9-205ENST00000433439 C12orf73Q69YU5 71 aa13.5□□□□□ -0.25
CNOT9-205ENST00000433439 PLBD1Q6P4A8 553 aa13.5□□□□□ -0.25
CNOT9-205ENST00000433439 BHLHA15Q7RTS1 189 aaPredicted RBP13.5□□□□□ -0.25
CNOT9-205ENST00000433439 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.5□□□□□ -0.25
CNOT9-205ENST00000433439 ZNF433Q8N7K0 673 aaPredicted RBP13.5□□□□□ -0.25
CNOT9-205ENST00000433439 TCEANCQ8N8B7 351 aa13.5□□□□□ -0.25
CNOT9-205ENST00000433439 NPEPL1Q8NDH3 523 aa13.5□□□□□ -0.25
CNOT9-205ENST00000433439 FAM81AQ8TBF8 368 aa13.5□□□□□ -0.25
CNOT9-205ENST00000433439 FNDC8Q8TC99 324 aa13.5□□□□□ -0.25
CNOT9-205ENST00000433439 RNASE6Q93091 150 aaKnown RBP13.5□□□□□ -0.25
CNOT9-205ENST00000433439 IL4I1Q96RQ9 567 aa13.5□□□□□ -0.25
CNOT9-205ENST00000433439 GRIP2Q9C0E4 1043 aa13.5□□□□□ -0.25
CNOT9-205ENST00000433439 SEC61A2Q9H9S3 476 aa13.5□□□□□ -0.25
CNOT9-205ENST00000433439 FAM118AQ9NWS6 357 aa13.5□□□□□ -0.25
CNOT9-205ENST00000433439 ELOVL5Q9NYP7 299 aa13.5□□□□□ -0.25
CNOT9-205ENST00000433439 TAS2R16Q9NYV7 291 aa13.5□□□□□ -0.25
CNOT9-205ENST00000433439 VSX1Q9NZR4 365 aaPredicted RBP13.5□□□□□ -0.25
CNOT9-205ENST00000433439 WIPF3A6NGB9 483 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 PRR23D1E9PI22 279 aaPredicted RBP13.49□□□□□ -0.25
CNOT9-205ENST00000433439 C16orf97H3BN30 126 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 DLGAP1O14490 977 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 PRKYO43930 277 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 KHDRBS3O75525 346 aaKnown RBP13.49□□□□□ -0.25
CNOT9-205ENST00000433439 GYPBP06028 91 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 PRR23D2P0DMB1 279 aaPredicted RBP13.49□□□□□ -0.25
CNOT9-205ENST00000433439 PAICSP22234 425 aaKnown RBP13.49□□□□□ -0.25
CNOT9-205ENST00000433439 CDAP32320 146 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 PYCR1P32322 319 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 AQP4P55087 323 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 TGFBR3Q03167 851 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 P2RY6Q15077 328 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 STK11Q15831 433 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 HIST3H3Q16695 136 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 ZNF362Q5T0B9 420 aaPredicted RBP13.49□□□□□ -0.25
CNOT9-205ENST00000433439 SFRP5Q5T4F7 317 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 OTPQ5XKR4 325 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 DNM1P34Q6PK57 102 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 SLC25A47Q6Q0C1 308 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 STAC2Q6ZMT1 411 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 ZNF813Q6ZN06 617 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 CPOQ8IVL8 374 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 DHRSXQ8N5I4 330 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 OR51L1Q8NGJ5 315 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 NMD3Q96D46 503 aaKnown RBP13.49□□□□□ -0.25
CNOT9-205ENST00000433439 RDH12Q96NR8 316 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 FOXB1Q99853 325 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 OR51V1Q9H2C8 321 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 IMPAD1Q9NX62 359 aa13.49□□□□□ -0.25
CNOT9-205ENST00000433439 COA3Q9Y2R0 106 aaPredicted RBP13.49□□□□□ -0.25
CNOT9-205ENST00000433439 LOC100130705A0A1B0GUX0 176 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 A0A1W2PR80 420 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 ZNF99A8MXY4 864 aaPredicted RBP13.48□□□□□ -0.25
CNOT9-205ENST00000433439 PRSS44E7EML9 344 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 RPL36A-HNRNPH2H7BZ11 118 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 DCTN6O00399 190 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 TLX2O43763 284 aaPredicted RBP13.48□□□□□ -0.25
CNOT9-205ENST00000433439 AHCYL1O43865 530 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 GPANK1O95872 356 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 CLUP10909 449 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 B4GALT1P15291 398 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 COX5AP20674 150 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 CRABP1P29762 137 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 GGT2P36268 569 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 UGT2B10P36537 528 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 GUCA1AP43080 201 aaPredicted RBP13.48□□□□□ -0.25
CNOT9-205ENST00000433439 CAPZA2P47755 286 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 PCYT1AP49585 367 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 CDC42P60953 191 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 SNCBQ16143 134 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 SGCAQ16586 387 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 FBXL19-AS1Q494R0 122 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 HIKESHIQ53FT3 197 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 KLHL12Q53G59 568 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 KLHL24Q6TFL4 600 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 IZUMO2Q6UXV1 221 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 CXXC5Q7LFL8 322 aaKnown RBP13.48□□□□□ -0.25
CNOT9-205ENST00000433439 OR6V1Q8N148 313 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 PROKR2Q8NFJ6 384 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 OR1K1Q8NGR3 316 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 UBE2FQ969M7 185 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 ZC3HAV1LQ96H79 300 aaKnown RBP13.48□□□□□ -0.25
CNOT9-205ENST00000433439 HRASLS5Q96KN8 279 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 SNX18Q96RF0 628 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 HCAR1Q9BXC0 346 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 ACTR6Q9GZN1 396 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 HINT3Q9NQE9 182 aaKnown RBP13.48□□□□□ -0.25
CNOT9-205ENST00000433439 B9D1Q9UPM9 204 aa13.48□□□□□ -0.25
CNOT9-205ENST00000433439 CLEC18AA5D8T8 446 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 C19orf84I3L1E1 186 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 CLIC3O95833 236 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 HLA-DQA2P01906 255 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 PSMB1P20618 241 aaKnown RBP13.47□□□□□ -0.25
CNOT9-205ENST00000433439 HOXC12P31275 282 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 VHLP40337 213 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 SH3BGRP55822 239 aaPredicted RBP13.47□□□□□ -0.25
CNOT9-205ENST00000433439 RPS7P62081 194 aaKnown RBP13.47□□□□□ -0.25
CNOT9-205ENST00000433439 TUBA1BP68363 451 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 TUBA4AP68366 448 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 TFF3Q07654 80 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms