RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 HPF1Q9NWY4 346 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 CEP192Q8TEP8 1941 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 TRBV4-1A0A0J9YWV2 114 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 APLNRP35414 380 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ARR3P36575 388 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 VEGFBP49765 207 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 GZMKP49863 264 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 TAS2R30P59541 319 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF239Q16600 458 aaKnown RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 SRSF7Q16629 238 aaKnown RBP eCLIP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 PRAMEF20Q5VT98 475 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF100Q8IYN0 542 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ARL14Q8N4G2 192 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 OR6X1Q8NH79 312 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 MCCC2Q9HCC0 563 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 DKKL1Q9UK85 242 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 CES1P1Q9UKY3 287 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF175Q9Y473 711 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 NPTNQ9Y639 398 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ASPDHA6ND91 283 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 KLRC4-KLRK1H3BQV0 150 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 J3QLW9 94 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 GABRPO00591 440 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF19P17023 458 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 RAB5BP61020 215 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 MRPS34P82930 218 aaKnown RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 ACSF3Q4G176 576 aaPredicted RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 RTN4RL1Q86UN2 441 aaPredicted RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 MMP21Q8N119 569 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 GPX8Q8TED1 209 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 EDARADDQ8WWZ3 215 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 C22orf15Q8WYQ4 148 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 APOBEC3DQ96AK3 386 aaPredicted RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 SDF2Q99470 211 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 METTL7AQ9H8H3 244 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 DNAJB12Q9NXW2 375 aaKnown RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 NSG1A0A0A6YYJ2 146 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 FIGNL2A6NMB9 653 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 NPIPA2E9PIF3 369 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 NPIPA3F8WFD2 350 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 H7C417 338 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 LILRB5O75023 590 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 HLA-DQA2P01906 255 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 GABRA1P14867 456 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 NDUFB7P17568 137 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 SRMP19623 302 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 TGM1P22735 817 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 MPLP40238 635 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 NCS1P62166 190 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 FAM162BQ5T6X4 162 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 MCATQ8IVS2 390 aaKnown RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 GABRG1Q8N1C3 465 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 CPT1CQ8TCG5 803 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 IL22RA2Q969J5 263 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 RBMXL1Q96E39 390 aaKnown RBP3.44□□□□□ -1.86
SHPRH-205ENST00000433355 OR8D2Q9GZM6 311 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 SLC6A17Q9H1V8 727 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 CHODLQ9H9P2 273 aa3.44□□□□□ -1.86
SHPRH-205ENST00000433355 OR6C6A6NF89 314 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 WRBO00258 174 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 CDRT1O95170 752 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SPI1P17947 270 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 RPS15P62841 145 aaKnown RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 C6orf132Q5T0Z8 1188 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 PLXDC2Q6UX71 529 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SPATC1Q76KD6 591 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SLC22A16Q86VW1 577 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 NANPQ8TBE9 248 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF431Q8TF32 576 aaPredicted RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 ESAMQ96AP7 390 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 MTFMTQ96DP5 389 aaKnown RBP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 OR7D2Q96RA2 312 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 MAP3K3Q99759 626 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.43□□□□□ -1.86
SHPRH-205ENST00000433355 PRDM7Q9NQW5 492 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 GPR27Q9NS67 375 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 IGLV3-12A0A075B6K2 115 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 ETV1P50549 477 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 BTN3A2P78410 334 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 PLGLB1Q02325 96 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 BCL2A1Q16548 175 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SPIN3Q5JUX0 258 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 C10orf128Q5T292 105 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 HES5Q5TA89 166 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 ZBTB46Q86UZ6 589 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TTC9BQ8N6N2 239 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 BPIFCQ8NFQ6 507 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 OR6K3Q8NGY3 331 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 INPP5KQ9BT40 448 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 CHST5Q9GZS9 411 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 MED13LQ71F56 2210 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 TICRRQ7Z2Z1 1910 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 A0A1W2PNV4 684 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 K7ERQ8 282 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SSX5O60225 188 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 CD8BP10966 210 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 PBX2P40425 430 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SSR4P51571 173 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 LYSMD4Q5XG99 296 aa3.43□□□□□ -1.86
SHPRH-205ENST00000433355 SCARB1Q8WTV0 552 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms