RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 DENND4CQ5VZ89 1909 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 C5orf42Q9H799 3197 aa10.5□□□□□ -0.73
HMGCS1-202ENST00000433297 A0A1W2PPE3 182 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 SRPX2O60687 465 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 ERGP11308 486 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 CPT2P23786 658 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 PTAFRP25105 342 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 ABCD3P28288 659 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 DCDP81605 110 aaKnown RBP10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 MESP2Q0VG99 397 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 PPP1R1AQ13522 171 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 ZNF345Q14585 488 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 TSC22D1Q15714 1073 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 NNATQ16517 81 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 DPY19L4Q7Z388 723 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 JAZF1Q86VZ6 243 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 BAP18Q8IXM2 172 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 ISOC2Q96AB3 205 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 FOXRED1Q96CU9 486 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 MKKSQ9NPJ1 570 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 TMEM74BQ9NUR3 256 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 DZANK1Q9NVP4 752 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 SERTAD3Q9UJW9 196 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 A0A0B4J2E0 115 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 A0A1B0GX12 115 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 DCDC2BA2VCK2 349 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 CD8AP01732 235 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 PRNPP04156 253 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 F13BP05160 661 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 SMIM6P0DI80 62 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 NQO2P16083 231 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 PGDP52209 483 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 SQSTM1Q13501 440 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 RAB11BQ15907 218 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 FAM76BQ5HYJ3 339 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 SLC39A5Q6ZMH5 540 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 LRRC69Q6ZNQ3 347 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 ETFBKMTQ8IXQ9 262 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 OR4K17Q8NGC6 315 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 OR52E1Q8NGJ3 308 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 ZNF417Q8TAU3 575 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 SLC6A7Q99884 636 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 WDR77Q9BQA1 342 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 SEMA6CQ9H3T2 930 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 RHOFQ9HBH0 211 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 SLC22A7Q9Y694 548 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 HLA-DQA2P01906 255 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 CPMP14384 443 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 MUC1P15941 1255 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 CD80P33681 288 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 RBM34P42696 430 aaKnown RBP10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 CDKN2AP42771 156 aaKnown RBP10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 FHL1Q13642 323 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 OR2L3Q8NG85 312 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 GPR148Q8TDV2 347 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 SEH1LQ96EE3 360 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 SLC25A21Q9BQT8 299 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 NAA11Q9BSU3 229 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 C20orf24Q9BUV8 137 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 EPHA6Q9UF33 1036 aa10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 CGGBP1Q9UFW8 167 aaPredicted RBP10.49□□□□□ -0.73
HMGCS1-202ENST00000433297 A0A1W2PQ45 241 aaPredicted RBP10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 A0A1W2PQY0 241 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 POM121BA6NF01 834 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 TMEM235A6NFC5 223 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 IGLON5A6NGN9 336 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 YKT6O15498 198 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 RNGTTO60942 597 aaKnown RBP10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 S100A8P05109 93 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 F2RL1P55085 397 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 C9orf152Q5JTZ5 239 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 ZNF585AQ6P3V2 769 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 FOXRED2Q8IWF2 684 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 PIK3IP1Q96FE7 263 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 CMKLR1Q99788 373 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 KXD1Q9BQD3 176 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 SEC11CQ9BY50 192 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 LAT2Q9GZY6 243 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 CST11Q9H112 138 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 ALX4Q9H161 411 aaPredicted RBP10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 CHMP1AQ9HD42 196 aaPredicted RBP10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 KLF15Q9UIH9 416 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 TMED7Q9Y3B3 224 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 FRMPD3Q5JV73 1810 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 MYO7AQ13402 2215 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 COLCA2A8K830 154 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 GMFGO60234 142 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 UPK3AO75631 287 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 GLCEO94923 617 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 SERPINA5P05154 406 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 SFTA3P0C7M3 94 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 DAOP14920 347 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 LSSP48449 732 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 OR2B8PP59922 312 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 CDK3Q00526 305 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 ZNF813Q6ZN06 617 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 TMPPEQ6ZT21 453 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 OR4N2Q8NGD1 307 aa10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 PARP12Q9H0J9 701 aaKnown RBP10.48□□□□□ -0.73
HMGCS1-202ENST00000433297 DPP7Q9UHL4 492 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms