RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 ROM1Q03395 351 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 PUDPQ08623 228 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 ZP4Q12836 540 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 FAPQ12884 760 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 SLC17A1Q14916 467 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 MEP1BQ16820 701 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 TMEM69Q5SWH9 247 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 PWWP2BQ6NUJ5 590 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 UTS2BQ765I0 119 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 TMPRSS9Q7Z410 1059 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 TMPRSS12Q86WS5 348 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 MFSD8Q8NHS3 518 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 SYNPRQ8TBG9 265 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 ZFAND1Q8TCF1 268 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 RNF128Q8TEB7 428 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 TSEN15Q8WW01 171 aaKnown RBP12.33□□□□□ -0.44
THBS3-202ENST00000428962 FCAMRQ8WWV6 532 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 NAT6Q93015 286 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 HGDQ93099 445 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 TMEM106AQ96A25 262 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 MIB2Q96AX9 1013 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 DDIT4LQ96D03 193 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 HAVCR1Q96D42 359 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 SCMH1Q96GD3 660 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 TMEM246Q9BRR3 403 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 GTPBP2Q9BX10 602 aaKnown RBP12.33□□□□□ -0.44
THBS3-202ENST00000428962 OR11A1Q9GZK7 315 aa12.33□□□□□ -0.44
THBS3-202ENST00000428962 C19orf25Q9UFG5 118 aaPredicted RBP12.33□□□□□ -0.44
THBS3-202ENST00000428962 TRAV6A0A075B6T7 132 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.32□□□□□ -0.44
THBS3-202ENST00000428962 FTCDNL1E5RQL4 147 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 YKT6O15498 198 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 ZNF208O43345 1280 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 KRT33AO76009 404 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 GIFP27352 417 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 CFPP27918 469 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 MSX1P28360 303 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 HOXA6P31267 233 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 RCVRNP35243 200 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 MAGEB1P43366 347 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 GZMKP49863 264 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 CCL7P80098 99 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 WDR38Q5JTN6 314 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 LRRC69Q6ZNQ3 347 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 BTN2A1Q7KYR7 527 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 KRT77Q7Z794 578 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 PLCZ1Q86YW0 608 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 IZUMO1Q8IYV9 350 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 DND1Q8IYX4 353 aaKnown RBP12.32□□□□□ -0.44
THBS3-202ENST00000428962 PRSS35Q8N3Z0 413 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 AUNIPQ9H7T9 357 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 SDHAF3Q9NRP4 125 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 EMC3Q9P0I2 261 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 STEAP1Q9UHE8 339 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 CPAMD8Q8IZJ3 1885 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 UNC13CQ8NB66 2214 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 IGHV5-10-1A0A0J9YXX1 117 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 VSTM2BA6NLU5 285 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 FAM47E-STBD1D6RA91 191 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 NPIPA5E9PKD4 350 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 GPANK1O95872 356 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 CTLA4P16410 223 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 CCKBRP32239 447 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 RPS27P42677 84 aaKnown RBP12.32□□□□□ -0.44
THBS3-202ENST00000428962 KIR3DL2P43630 455 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 RIDAP52758 137 aaKnown RBP12.32□□□□□ -0.44
THBS3-202ENST00000428962 TNK1Q13470 666 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 TEX30Q5JUR7 227 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 CD276Q5ZPR3 534 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 H1FNTQ75WM6 255 aaPredicted RBP12.32□□□□□ -0.44
THBS3-202ENST00000428962 CPEB2Q7Z5Q1 589 aaKnown RBP12.32□□□□□ -0.44
THBS3-202ENST00000428962 PPP1R3BQ86XI6 285 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 SLC38A9Q8NBW4 561 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 OR56B4Q8NH76 319 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 GRPEL2Q8TAA5 225 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 SAP25Q8TEE9 199 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 RNF138Q8WVD3 245 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 CCDC74BQ96LY2 380 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 GHITMQ9H3K2 345 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 KLRF1Q9NZS2 232 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 NPIPA1Q9UND3 350 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 FOXJ3Q9UPW0 622 aa12.32□□□□□ -0.44
THBS3-202ENST00000428962 TECTAO75443 2155 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 EXPH5Q8NEV8 1989 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 A0A087WV48 116 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 LY6G6EA0A0G2JKS1 128 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 A0A1W2PQM1 296 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 TTLL8A6PVC2 850 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 ACOT7O00154 380 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 SIGLEC6O43699 453 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 ZFAND5O76080 213 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 WISP1O95388 367 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 TIAF1O95411 115 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 MT-ND4P03905 459 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 ADRB1P08588 477 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 H2AFB2P0C5Z0 115 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 ADRA2CP18825 462 aa12.31□□□□□ -0.44
THBS3-202ENST00000428962 TCEA1P23193 301 aaKnown RBP12.31□□□□□ -0.44
THBS3-202ENST00000428962 ZNF41P51814 821 aaPredicted RBP12.31□□□□□ -0.44
THBS3-202ENST00000428962 CLDN12P56749 244 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms