RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 SNAPC5O75971 98 aa14.57□□□□□ -0.08
PKP4-205ENST00000426248 BMP7P18075 431 aa14.57□□□□□ -0.08
PKP4-205ENST00000426248 GSTM3P21266 225 aa14.57□□□□□ -0.08
PKP4-205ENST00000426248 SDHAP31040 664 aa14.57□□□□□ -0.08
PKP4-205ENST00000426248 HSD11B2P80365 405 aa14.57□□□□□ -0.08
PKP4-205ENST00000426248 ZNF615Q8N8J6 731 aa14.57□□□□□ -0.08
PKP4-205ENST00000426248 CASTOR1Q8WTX7 329 aa14.57□□□□□ -0.08
PKP4-205ENST00000426248 SMPDL3BQ92485 455 aa14.57□□□□□ -0.08
PKP4-205ENST00000426248 OPN4Q9UHM6 478 aa14.57□□□□□ -0.08
PKP4-205ENST00000426248 DAPP1Q9UN19 280 aa14.57□□□□□ -0.08
PKP4-205ENST00000426248 ITGA3P26006 1051 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 GFOD2Q3B7J2 385 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 TMEM201Q5SNT2 666 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 OR52L1Q8NGH7 329 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 C4orf36Q96KX1 117 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 ASB6Q9NWX5 421 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 RARRES3Q9UL19 164 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 CAMK2AQ9UQM7 478 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 MAGEB4O15481 346 aaPredicted RBP14.56□□□□□ -0.08
PKP4-205ENST00000426248 CER1O95813 267 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 MMP15P51511 669 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 RUNX2Q13950 521 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 TOMM20Q15388 145 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 TGIF1Q15583 401 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 SLC48A1Q6P1K1 146 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 KCTD9Q7L273 389 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 SLC38A5Q8WUX1 472 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 C5orf51A6NDU8 294 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 EFCAB7A8K855 629 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 GLB1P16278 677 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 FBLP22087 321 aaKnown RBP14.56□□□□□ -0.08
PKP4-205ENST00000426248 ITPKBP27987 946 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 AGTR1P30556 359 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 DUSP3P51452 185 aaPredicted RBP14.56□□□□□ -0.08
PKP4-205ENST00000426248 TRA2BP62995 288 aaKnown RBP14.56□□□□□ -0.08
PKP4-205ENST00000426248 DCAF12L2Q5VW00 463 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 FCRL6Q6DN72 434 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 GUSBP11Q6P575 273 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 CLEC9AQ6UXN8 241 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 DERL3Q96Q80 235 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 CUTCQ9NTM9 273 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 PIPOXQ9P0Z9 390 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 EPHA6Q9UF33 1036 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 KCNK7Q9Y2U2 307 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 FAM86C2PA6NEL3 165 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 A8MVJ9 347 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 EEF1E1-BLOC1S5C9J1V9 151 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 H7C1Q1 480 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 ATP1B1P05026 303 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 ATF1P18846 271 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 E2F1Q01094 437 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 PON3Q15166 354 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 PAPD4Q6PIY7 484 aaKnown RBP14.56□□□□□ -0.08
PKP4-205ENST00000426248 OR51Q1Q8NH59 317 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 DUSP15Q9H1R2 295 aaPredicted RBP14.56□□□□□ -0.08
PKP4-205ENST00000426248 NCDNQ9UBB6 729 aa14.56□□□□□ -0.08
PKP4-205ENST00000426248 RBBP9O75884 186 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 ARL6IP5O75915 188 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 GPR75O95800 540 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 ABCD3P28288 659 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 RGS19P49795 217 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 PLA2G7Q13093 441 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 TCEAL6Q6IPX3 200 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 OR2AK2Q8NG84 335 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 CNRIP1Q96F85 164 aaPredicted RBP14.55□□□□□ -0.08
PKP4-205ENST00000426248 WBP1Q96G27 269 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 SCARF2Q96GP6 870 aaPredicted RBP14.55□□□□□ -0.08
PKP4-205ENST00000426248 SMCO4Q9NRQ5 59 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 CBLCQ9ULV8 474 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 A0A1W2PS29 197 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 ARAFP10398 606 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 CPMP14384 443 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 TP53I3Q53FA7 332 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 TMEM255AQ5JRV8 349 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 CMTM4Q8IZR5 234 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 DNAAF1Q8NEP3 725 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 GHSRQ92847 366 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 SLAMF9Q96A28 289 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 TESQ9UGI8 421 aaKnown RBP14.55□□□□□ -0.08
PKP4-205ENST00000426248 FARSAQ9Y285 508 aaKnown RBP14.55□□□□□ -0.08
PKP4-205ENST00000426248 NPIPA5A0A0B4J1W7 369 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 NPIPA7E9PJI5 369 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 GPR37O15354 613 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 GYPBP06028 91 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 NPIPA8P0DM63 369 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 PRF1P14222 555 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 RAG2P55895 527 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 FOXRED2Q8IWF2 684 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 CYB561A3Q8NBI2 242 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 CD300LFQ8TDQ1 290 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 ST7LQ8TDW4 575 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 SMIM4Q8WVI0 70 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 NAT6Q93015 286 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 OR6C1Q96RD1 312 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 CALML5Q9NZT1 146 aa14.55□□□□□ -0.08
PKP4-205ENST00000426248 VAMP1P23763 118 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 EIF2S3P41091 472 aaKnown RBP14.54□□□□□ -0.08
PKP4-205ENST00000426248 OR7E24Q6IFN5 339 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 UBE3DQ7Z6J8 389 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 GATSQ8NAP1 163 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms