RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 BAIAP2Q9UQB8 552 aa21.42■■□□□ 1.02
VEGFA-209ENST00000425836 AMDHD2Q9Y303 409 aa21.42■■□□□ 1.02
VEGFA-209ENST00000425836 A6NNC1 897 aa21.41■■□□□ 1.02
VEGFA-209ENST00000425836 SIAH2O43255 324 aa21.41■■□□□ 1.02
VEGFA-209ENST00000425836 HOXC12P31275 282 aa21.41■■□□□ 1.02
VEGFA-209ENST00000425836 ZNF84P51523 738 aa21.41■■□□□ 1.02
VEGFA-209ENST00000425836 ZNF362Q5T0B9 420 aaPredicted RBP21.41■■□□□ 1.02
VEGFA-209ENST00000425836 LEG1Q6P5S2 330 aa21.41■■□□□ 1.02
VEGFA-209ENST00000425836 KLHL24Q6TFL4 600 aa21.41■■□□□ 1.02
VEGFA-209ENST00000425836 SSX8Q7RTT4 187 aa21.41■■□□□ 1.02
VEGFA-209ENST00000425836 JAZF1Q86VZ6 243 aa21.41■■□□□ 1.02
VEGFA-209ENST00000425836 PARP8Q8N3A8 854 aa21.41■■□□□ 1.02
VEGFA-209ENST00000425836 IQCF1Q8N6M8 205 aa21.41■■□□□ 1.02
VEGFA-209ENST00000425836 OR52E2Q8NGJ4 325 aa21.41■■□□□ 1.02
VEGFA-209ENST00000425836 C14orf79Q96F83 325 aa21.41■■□□□ 1.02
VEGFA-209ENST00000425836 OBP2BQ9NPH6 170 aa21.41■■□□□ 1.02
VEGFA-209ENST00000425836 KRT84Q9NSB2 600 aa21.41■■□□□ 1.02
VEGFA-209ENST00000425836 TMEFF2Q9UIK5 374 aaPredicted RBP21.41■■□□□ 1.02
VEGFA-209ENST00000425836 ARPC4-TTLL3A0A0A6YYG9 625 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 DEFB108AA8MXU0 73 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 GIPRP48546 466 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 UBE2NP61088 152 aaKnown RBP21.4■■□□□ 1.02
VEGFA-209ENST00000425836 PPP2R2BQ00005 443 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.4■■□□□ 1.02
VEGFA-209ENST00000425836 ETFDHQ16134 617 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 PGGHGQ32M88 737 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 C1QTNF12Q5T7M4 302 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 SNX18Q96RF0 628 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 CIB1Q99828 191 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 OSBPL10Q9BXB5 764 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 NPAP1Q9NZP6 1156 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 FAM221AA4D161 298 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 CTLA4P16410 223 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 CDAP32320 146 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 TUBA1BP68363 451 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 TUBA4AP68366 448 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 ELF3P78545 371 aaPredicted RBP21.4■■□□□ 1.02
VEGFA-209ENST00000425836 GINS1Q14691 196 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 TUBA1AQ71U36 451 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 SLC22A24Q8N4F4 322 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 NPEPL1Q8NDH3 523 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 SDR9C7Q8NEX9 313 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 HTRA1Q92743 480 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 DDOQ99489 341 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 C1QTNF6Q9BXI9 259 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 NUAK2Q9H093 628 aa21.4■■□□□ 1.02
VEGFA-209ENST00000425836 ANKHD1Q8IWZ3 2542 aaKnown RBP21.39■■□□□ 1.01
VEGFA-209ENST00000425836 SLC16A7O60669 478 aa21.39■■□□□ 1.01
VEGFA-209ENST00000425836 WNT11O96014 354 aa21.39■■□□□ 1.01
VEGFA-209ENST00000425836 PRF1P14222 555 aa21.39■■□□□ 1.01
VEGFA-209ENST00000425836 CRISP1P54107 249 aa21.39■■□□□ 1.01
VEGFA-209ENST00000425836 CDK5Q00535 292 aa21.39■■□□□ 1.01
VEGFA-209ENST00000425836 ACSM5Q6NUN0 579 aa21.39■■□□□ 1.01
VEGFA-209ENST00000425836 SLC27A4Q6P1M0 643 aa21.39■■□□□ 1.01
VEGFA-209ENST00000425836 CCDC36Q8IYA8 594 aa21.39■■□□□ 1.01
VEGFA-209ENST00000425836 RBM4BQ9BQ04 359 aaKnown RBP21.39■■□□□ 1.01
VEGFA-209ENST00000425836 RBM4Q9BWF3 364 aaKnown RBP21.39■■□□□ 1.01
VEGFA-209ENST00000425836 OR6C68A6NDL8 312 aa21.38■■□□□ 1.01
VEGFA-209ENST00000425836 ZNF503-AS2A6NEH8 195 aa21.38■■□□□ 1.01
VEGFA-209ENST00000425836 RENP00797 406 aa21.38■■□□□ 1.01
VEGFA-209ENST00000425836 OR8G3PP0DMU2 310 aa21.38■■□□□ 1.01
VEGFA-209ENST00000425836 IGFBP5P24593 272 aa21.38■■□□□ 1.01
VEGFA-209ENST00000425836 MRPS34P82930 218 aaKnown RBP21.38■■□□□ 1.01
VEGFA-209ENST00000425836 TLE4Q04727 773 aa21.38■■□□□ 1.01
VEGFA-209ENST00000425836 NRN1LQ496H8 165 aa21.38■■□□□ 1.01
VEGFA-209ENST00000425836 BEX5Q5H9J7 111 aa21.38■■□□□ 1.01
VEGFA-209ENST00000425836 FOXL2NBQ6ZUU3 175 aa21.38■■□□□ 1.01
VEGFA-209ENST00000425836 SKA3Q8IX90 412 aa21.38■■□□□ 1.01
VEGFA-209ENST00000425836 NABP1Q96AH0 204 aa21.38■■□□□ 1.01
VEGFA-209ENST00000425836 TSSK2Q96PF2 358 aa21.38■■□□□ 1.01
VEGFA-209ENST00000425836 NGBQ9NPG2 151 aa21.38■■□□□ 1.01
VEGFA-209ENST00000425836 ZNF224Q9NZL3 707 aa21.38■■□□□ 1.01
VEGFA-209ENST00000425836 PKDREJQ9NTG1 2253 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.37■■□□□ 1.01
VEGFA-209ENST00000425836 CTAG2O75638 210 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 HRGP04196 525 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 LOXP28300 417 aaPredicted RBP21.37■■□□□ 1.01
VEGFA-209ENST00000425836 SSTR2P30874 369 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 GRK5P34947 590 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 ZNF83P51522 516 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 ESRRGP62508 458 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 DBPQ10586 325 aaPredicted RBP21.37■■□□□ 1.01
VEGFA-209ENST00000425836 RCN1Q15293 331 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 TMEM236Q5W0B7 351 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 OR6V1Q8N148 313 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 SLC37A3Q8NCC5 494 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 SH3GL3Q99963 347 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 RERGLQ9H628 205 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 SIAEQ9HAT2 523 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 B3GNT2Q9NY97 397 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 KLHL21Q9UJP4 597 aa21.37■■□□□ 1.01
VEGFA-209ENST00000425836 DCTN6O00399 190 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 EI24O14681 340 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 KHDRBS3O75525 346 aaKnown RBP21.36■■□□□ 1.01
VEGFA-209ENST00000425836 GOSR1O95249 250 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 HLA-HP01893 362 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 ANPEPP15144 967 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 NPR2P20594 1047 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 CAPZA2P47755 286 aa21.36■■□□□ 1.01
VEGFA-209ENST00000425836 DAG1Q14118 895 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms