RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 CHN1P15882 459 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 IL2RGP31785 369 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 PPP1CCP36873 323 aaKnown RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 TGFBR2P37173 567 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 MMP12P39900 470 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 PGGT1BP53609 377 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 AP2S1P53680 142 aaPredicted RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 RPP30P78346 268 aaKnown RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 FXNQ16595 210 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 RFX4Q33E94 735 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 TREML4Q6UXN2 200 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 CYP2R1Q6VVX0 501 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 TSPAN33Q86UF1 283 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 OR5T2Q8NGG2 359 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 OR52M1Q8NGK5 317 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 NEIL3Q8TAT5 605 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 SGK3Q96BR1 496 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 PANX1Q96RD7 426 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 PCDHB18PQ96TA0 734 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 SULT4A1Q9BR01 284 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 INPP5KQ9BT40 448 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 NCOR1P1Q9H4R4 102 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF275Q9NSD4 429 aaPredicted RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 MED9Q9NWA0 146 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 SIDT1Q9NXL6 827 aaKnown RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 MARCOQ9UEW3 520 aaPredicted RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 TBC1D29Q9UFV1 150 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 PPP1R3CQ9UQK1 317 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 TMEM5Q9Y2B1 443 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 POLDIP2Q9Y2S7 368 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 CD5LO43866 347 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 LYZL6O75951 148 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 APOC4P55056 127 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 SEC61A1P61619 476 aaKnown RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 FRG1Q14331 258 aaKnown RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 KLHDC7AQ5VTJ3 777 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 PLCXD3Q63HM9 321 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 KANK2Q63ZY3 851 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 TIGD3Q6B0B8 471 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 ENTHD1Q8IYW4 607 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 CDRT4Q8N9R6 151 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 SPATA4Q8NEY3 305 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 COQ8AQ8NI60 647 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 DUSP19Q8WTR2 217 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 ASB13Q8WXK3 278 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 TFAP2BQ92481 460 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 NEIL1Q96FI4 390 aaPredicted RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 C1orf50Q9BV19 199 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 ZDHHC18Q9NUE0 388 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 EHD3Q9NZN3 535 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 STYXL1Q9Y6J8 313 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 RP1L1Q8IWN7 2480 aaPredicted RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 PLCE1Q9P212 2302 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 C9JVG2 144 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 SAP18O00422 153 aaKnown RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 KLF4O43474 513 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 PEX11AO75192 247 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 TMEM127O75204 238 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 GLRA3O75311 464 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 GPR75O95800 540 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 LY6G6DO95868 133 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 EPOP01588 193 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 GLRA1P23415 457 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 FPR3P25089 353 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 SOX3P41225 446 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 APOBEC1P41238 236 aaKnown RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 ALDH3B2P48448 385 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 CD81P60033 236 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 TAGLNQ01995 201 aaKnown RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 DPTQ07507 201 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 TESK1Q15569 626 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 ABCA11PQ4W5N1 156 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 VAX1Q5SQQ9 334 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 RPUSD3Q6P087 351 aaKnown RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 PRSS57Q6UWY2 283 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF788Q6ZQV5 615 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 PRSS48Q7RTY5 328 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 DPY19L4Q7Z388 723 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 PSMA8Q8TAA3 256 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 EEF1AKMT1Q8WVE0 214 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 KTI12Q96EK9 354 aaPredicted RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 IL17FQ96PD4 163 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 COQ7Q99807 217 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 OPN3Q9H1Y3 402 aaPredicted RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 PRDM13Q9H4Q3 707 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 ALG9Q9H6U8 611 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 GAR1Q9NY12 217 aaKnown RBP3.19□□□□□ -1.9
TOP2A-201ENST00000423485 VWA7Q9Y334 891 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 TRAF6Q9Y4K3 522 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 SNX10Q9Y5X0 201 aa3.19□□□□□ -1.9
TOP2A-201ENST00000423485 FAT2Q9NYQ8 4349 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 HMX3A6NHT5 357 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 SAC3D1A6NKF1 404 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 TNFSF11O14788 317 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 PFDN1O60925 122 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 NUDT7P0C024 238 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 FAM157BP0CG42 384 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 OR8G3PP0DMU2 310 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 MYL12AP19105 171 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 PTBP1P26599 531 aaKnown RBP eCLIP3.18□□□□□ -1.92e-6■■■■□ 26
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms