RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 RAB40AQ8WXH6 277 aa17.04■□□□□ 0.32
CROCCP3-202ENST00000420820 AKAP1Q92667 903 aaKnown RBP eCLIP17.04■□□□□ 0.32
CROCCP3-202ENST00000420820 ELOVL3Q9HB03 270 aa17.04■□□□□ 0.32
CROCCP3-202ENST00000420820 MCUBQ9NWR8 336 aa17.04■□□□□ 0.32
CROCCP3-202ENST00000420820 COPZ2Q9P299 210 aa17.04■□□□□ 0.32
CROCCP3-202ENST00000420820 TRAV8-7A0A075B6U6 113 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 A0A0A6YYJ9 748 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 C2orf72A6NCS6 295 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 ZNF208O43345 1280 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 SULT1B1O43704 296 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 TDGF1P13385 188 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 HLA-DOBP13765 273 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 PTGS2P35354 604 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 PTH2RP49190 550 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 SCAND1P57086 179 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 MFSD13AQ14CX5 517 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 SLC18B1Q6NT16 456 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 IZUMO1Q8IYV9 350 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 OR51A4Q8NGJ6 313 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 THAP3Q8WTV1 239 aaPredicted RBP17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 ATOH1Q92858 354 aaPredicted RBP17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 MIB2Q96AX9 1013 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 GFM1Q96RP9 751 aaKnown RBP17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 GHITMQ9H3K2 345 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 AUNIPQ9H7T9 357 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 NIPAL2Q9H841 368 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 FOXJ3Q9UPW0 622 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 HRH3Q9Y5N1 445 aa17.03■□□□□ 0.32
CROCCP3-202ENST00000420820 IGLV3-32A0A0A0MS00 114 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 CENPBD1B2RD01 187 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 C1QBP02746 253 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 GZMKP49863 264 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 RAG2P55895 527 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 CLDN12P56749 244 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 RAB25P57735 213 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 PUDPQ08623 228 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 NDUFA5Q16718 116 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 SLC25A53Q5H9E4 307 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 SLC22A10Q63ZE4 541 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 LCN10Q6JVE6 187 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 LRRN1Q6UXK5 716 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 OR5L2Q8NGL0 311 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 ASB10Q8WXI3 467 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 THRSPQ92748 146 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 HAVCR1Q96D42 359 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 NXPE2Q96DL1 559 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 ARL5BQ96KC2 179 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 FANCFQ9NPI8 374 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 FSCN3Q9NQT6 498 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 NUDT15Q9NV35 164 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 PAQR5Q9NXK6 330 aaPredicted RBP17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 MED11Q9P086 117 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 B3GALT1Q9Y5Z6 326 aa17.02■□□□□ 0.32
CROCCP3-202ENST00000420820 A6NIZ1 184 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 C19orf67A6NJJ6 358 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 GABARAPH6UMI1 98 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 TPPPO94811 219 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 DHFRP00374 187 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 HLA-DQA2P01906 255 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 CYC1P08574 325 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 GIFP27352 417 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 CRABP1P29762 137 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 ERP29P30040 261 aaKnown RBP17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 GDNFP39905 211 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 PTGDSP41222 190 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 RAP1BP61224 184 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 RAP1AP62834 184 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 MELKQ14680 651 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 ARSKQ6UWY0 536 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 SLC35D2Q76EJ3 337 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 WDR5BQ86VZ2 330 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 EID2Q8N6I1 236 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 ZNF454Q8N9F8 522 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 TMEM106AQ96A25 262 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 ING3Q9NXR8 418 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 BOLA1Q9Y3E2 137 aa17.02■□□□□ 0.31
CROCCP3-202ENST00000420820 PNPP00491 289 aa17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 FREM3P0C091 2139 aa17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 MAP2K6P52564 334 aa17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 FAPQ12884 760 aa17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 PCK2Q16822 640 aa17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 RNASE12Q5GAN4 147 aaKnown RBP17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 BCL2L15Q5TBC7 163 aa17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 OTPQ5XKR4 325 aa17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 MRPL14Q6P1L8 145 aaKnown RBP17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 DNM1P46Q6ZS02 220 aa17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 H1FNTQ75WM6 255 aaPredicted RBP17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 SYNPRQ8TBG9 265 aa17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 NAT6Q93015 286 aa17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 S100A16Q96FQ6 103 aaKnown RBP17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 FOXN4Q96NZ1 517 aa17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 CACNG6Q9BXT2 260 aa17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 POTEKPQ9BYX7 375 aa17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 PLSCR3Q9NRY6 295 aa17.01■□□□□ 0.31
CROCCP3-202ENST00000420820 DKK1O94907 266 aa17■□□□□ 0.31
CROCCP3-202ENST00000420820 MSX1P28360 303 aa17■□□□□ 0.31
CROCCP3-202ENST00000420820 FOXF1Q12946 379 aa17■□□□□ 0.31
CROCCP3-202ENST00000420820 SNTB2Q13425 540 aaKnown RBP17■□□□□ 0.31
CROCCP3-202ENST00000420820 TNK1Q13470 666 aa17■□□□□ 0.31
CROCCP3-202ENST00000420820 Q5BKY6 102 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms