RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 ZDHHC11Q9H8X9 412 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 ACKR4Q9NPB9 350 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 ISYNA1Q9NPH2 558 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 NDUFB11Q9NX14 153 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 ERVK13-1Q9NX77 482 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 KLHL13Q9P2N7 655 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 KCNG2Q9UJ96 466 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 LAMP5Q9UJQ1 280 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 CAMK2AQ9UQM7 478 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 LSM2Q9Y333 95 aaKnown RBP5.32□□□□□ -1.56
HMGB3-202ENST00000419110 CSAG2Q9Y5P2 127 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 LIPGQ9Y5X9 500 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 CFAP54Q96N23 3096 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 URB1O60287 2271 aaKnown RBP5.31□□□□□ -1.56
HMGB3-202ENST00000419110 FREM2Q5SZK8 3169 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 IGLV1-36A0A0B4J1U3 117 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF814B7Z6K7 855 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 MS4A18H0YCH9 400 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 K7ENP7 123 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 GPR171O14626 319 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 AIREO43918 545 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 EFNA2O43921 213 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 SLC16A7O60669 478 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 CYTIPO60759 359 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 SLC43A1O75387 559 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 CRYABP02511 175 aaKnown RBP5.31□□□□□ -1.56
HMGB3-202ENST00000419110 TFP02787 698 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 KRT8P05787 483 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 LIMS3P0CW19 117 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 LIMS4P0CW20 117 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 HLA-DOBP13765 273 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF823P16415 610 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 PSMA1P25786 263 aaKnown RBP5.31□□□□□ -1.56
HMGB3-202ENST00000419110 TGFBR2P37173 567 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 PLA2G5P39877 138 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF84P51523 738 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 P2RY4P51582 365 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 AGFG1P52594 562 aaKnown RBP5.31□□□□□ -1.56
HMGB3-202ENST00000419110 CLDN15P56746 228 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 CLDN18P56856 261 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 CARD18P57730 90 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 ADAM8P78325 824 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 H3F3AP84243 136 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 FMODQ06828 376 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 GTF3C1Q12789 2109 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 CAMK2DQ13557 499 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 GALEQ14376 348 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 SLC10A1Q14973 349 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 RNPS1Q15287 305 aaKnown RBP5.31□□□□□ -1.56
HMGB3-202ENST00000419110 BCL2A1Q16548 175 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 CNPY1Q3B7I2 92 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 MS4A18Q3C1V0 323 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 THEM4Q5T1C6 240 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 LINC01590Q5TEZ4 76 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 CARD17Q5XLA6 110 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 VASNQ6EMK4 673 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 INO80CQ6PI98 192 aaPredicted RBP5.31□□□□□ -1.56
HMGB3-202ENST00000419110 FAM180AQ6UWF9 173 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 IGFL3Q6UXB1 125 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 PLEKHG7Q6ZR37 379 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 P4HA3Q7Z4N8 544 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.31□□□□□ -1.56
HMGB3-202ENST00000419110 ZBTB46Q86UZ6 589 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 ANKRD13BQ86YJ7 626 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 GLB1L2Q8IW92 636 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 ALDH16A1Q8IZ83 802 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 KDM8Q8N371 416 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 GPR137CQ8N3F9 429 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 EXD3Q8N9H8 876 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 SYT14Q8NB59 555 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 RNF128Q8TEB7 428 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 SNX33Q8WV41 574 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 ASB17Q8WXJ9 295 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 ZCCHC14Q8WYQ9 949 aaKnown RBP5.31□□□□□ -1.56
HMGB3-202ENST00000419110 TMEM45BQ96B21 275 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 TMIGD2Q96BF3 282 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 SARAFQ96BY9 339 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 DGCR14Q96DF8 476 aaKnown RBP5.31□□□□□ -1.56
HMGB3-202ENST00000419110 YIPF6Q96EC8 236 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 C4orf36Q96KX1 117 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 OR5M11Q96RB7 305 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 UCN2Q96RP3 112 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 TEAD3Q99594 435 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 DOK1Q99704 481 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 FUNDC2Q9BWH2 189 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 TTTY10Q9BZA0 68 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 ULBP2Q9BZM5 246 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 YIPF3Q9GZM5 350 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 NUAK2Q9H093 628 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 KCNN2Q9H2S1 579 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 WDR76Q9H967 626 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 EXOSC4Q9NPD3 245 aaKnown RBP5.31□□□□□ -1.56
HMGB3-202ENST00000419110 CLEC2DQ9UHP7 191 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 GNG8Q9UK08 70 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 IKZF2Q9UKS7 526 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 STUB1Q9UNE7 303 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 B9D1Q9UPM9 204 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF175Q9Y473 711 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 CEPT1Q9Y6K0 416 aa5.31□□□□□ -1.56
HMGB3-202ENST00000419110 NCOA6Q14686 2063 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms