RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SLC25A47Q6Q0C1 308 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 ZNF704Q6ZNC4 412 aaPredicted RBP20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 DPPA2Q7Z7J5 298 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 TMEM179BQ7Z7N9 219 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 DEPDC4Q8N2C3 294 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 SLC22A24Q8N4F4 322 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 NSMAFQ92636 917 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 NMD3Q96D46 503 aaKnown RBP20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 HS3ST6Q96QI5 342 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 TMEM204Q9BSN7 226 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 DENND2DQ9H6A0 471 aaPredicted RBP20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 PLEKHF2Q9H8W4 249 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 CRYBG3Q68DQ2 2970 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 LRBAP50851 2863 aa20.17■□□□□ 0.82
SMARCB1-205ENST00000417137 ABCA12Q86UK0 2595 aa20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 SLC22A23A1A5C7 686 aa20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 SOCS2O14508 198 aa20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 SLC2A10O95528 541 aa20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 CD79AP11912 226 aa20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 CBR1P16152 277 aa20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 CD40P25942 277 aa20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 ARR3P36575 388 aa20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 KPNB1Q14974 876 aaKnown RBP20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 C3orf36Q3SXR2 165 aa20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 MESTQ5EB52 335 aa20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 SHQ1Q6PI26 577 aaKnown RBP20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 JAZF1Q86VZ6 243 aa20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 RASD2Q96D21 266 aa20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 KCNN2Q9H2S1 579 aa20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 EGLN3Q9H6Z9 239 aa20.16■□□□□ 0.82
SMARCB1-205ENST00000417137 UBL3O95164 117 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 TUBA1BP68363 451 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 TUBA4AP68366 448 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 MRPS34P82930 218 aaKnown RBP20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 FMODQ06828 376 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 GSG1Q2KHT4 349 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 ZFP1Q6P2D0 407 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 TUBA1AQ71U36 451 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 OR5K1Q8NHB7 308 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 SLC38A2Q96QD8 506 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 NIPSNAP1Q9BPW8 284 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 KCNS3Q9BQ31 491 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 SIAEQ9HAT2 523 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 NTN4Q9HB63 628 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 TBC1D23Q9NUY8 699 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 CRNNQ9UBG3 495 aaPredicted RBP20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 BAIAP2Q9UQB8 552 aa20.15■□□□□ 0.82
SMARCB1-205ENST00000417137 H7C1C5 153 aa20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 ABCD4O14678 606 aa20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 HLA-HP01893 362 aa20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 LCN6P62502 163 aa20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 CLEC12AQ5QGZ9 265 aa20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 HIPK1Q86Z02 1210 aa20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 SKA3Q8IX90 412 aa20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 PIAS4Q8N2W9 510 aaPredicted RBP20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 ATG16L2Q8NAA4 619 aa20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 DNAJC9Q8WXX5 260 aa20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 SNX18Q96RF0 628 aa20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 TSSK6Q9BXA6 273 aa20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 SEC61A2Q9H9S3 476 aa20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 B3GNT2Q9NY97 397 aa20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 VSX1Q9NZR4 365 aaPredicted RBP20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 FBXL3Q9UKT7 428 aa20.14■□□□□ 0.81
SMARCB1-205ENST00000417137 A0A1W2PPR1 153 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 RAB36O95755 333 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 RENP00797 406 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 IGKV3-15P01624 115 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 PRKACGP22612 351 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 SGCAQ16586 387 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 SLC36A2Q495M3 483 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 ADAM5Q6NVV9 412 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 DNM1P34Q6PK57 102 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 SLC22A25Q6T423 547 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 SLC16A14Q7RTX9 510 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 MDP1Q86V88 176 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 IL17RDQ8NFM7 739 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 SH3GL3Q99963 347 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 UBTD1Q9HAC8 227 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 KIF17Q9P2E2 1029 aa20.13■□□□□ 0.81
SMARCB1-205ENST00000417137 IGKV1D-43A0A0B4J1Z2 117 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 G3V2T6 193 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 H3BN98 237 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 SLC16A7O60669 478 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 KHDRBS3O75525 346 aaKnown RBP20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 PLAUP00749 431 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 HIST1H1CP16403 213 aaKnown RBP20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 CRABP1P29762 137 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 CDKN2AP42771 156 aaKnown RBP20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 RAB1AP62820 205 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 PIGFQ07326 219 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 TMEM53Q6P2H8 277 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 ZDHHC13Q8IUH4 622 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 HS3ST5Q8IZT8 346 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 OR2T33Q8NG76 320 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 OR4K13Q8NH42 304 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 TEX47Q8TBZ9 253 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 PYDC1Q8WXC3 89 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 LRTOMTQ8WZ04 291 aa20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 AKAP1Q92667 903 aaKnown RBP eCLIP20.12■□□□□ 0.81
SMARCB1-205ENST00000417137 CENPNQ96H22 339 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms