RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 KCNK2O95069 426 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 MT-ND2P03891 347 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 RPS17P08708 135 aaKnown RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 STSP08842 583 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ALPIP09923 528 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 CXCL8P10145 99 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ACP2P11117 423 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 IL7P13232 177 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 DARSP14868 501 aaKnown RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 CD36P16671 472 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 CTRB1P17538 263 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 NELFEP18615 380 aaKnown RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 IGFBP5P24593 272 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 CHI3L1P36222 383 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLC1A2P43004 574 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZFP36L2P47974 494 aaKnown RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ARRB1P49407 418 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ATP5J2P56134 94 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR2B6P58173 313 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 SEC61GP60059 68 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 TPI1P60174 286 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 UBE2G2P60604 165 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 RAB14P61106 215 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 RAB11AP62491 216 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 CSNK1G2P78368 415 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 CSTF1Q05048 431 aaKnown RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 SMARCB1Q12824 385 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 MADCAM1Q13477 382 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ASAH1Q13510 395 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ELAVL3Q14576 367 aaKnown RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 POU6F1Q14863 301 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 TAB1Q15750 504 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 USF2Q15853 346 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 RAB11BQ15907 218 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 PPP1R3AQ16821 1122 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 GTDC1Q4AE62 458 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ARMCX4Q5H9R4 360 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 TPRG1LQ5T0D9 272 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ATAD3CQ5T2N8 411 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ADAMTSL4-AS1Q5T5F5 129 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 C6orf183Q5T699 404 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 GPR157Q5UAW9 335 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 MFSD14CQ5VZR4 134 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 BSPRYQ5W0U4 402 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 KDM4DQ6B0I6 523 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 CTRB2Q6GPI1 263 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 DHRS7BQ6IAN0 325 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 LAIR2Q6ISS4 152 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 PYHIN1Q6K0P9 492 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 TBPL2Q6SJ96 375 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 FAM198BQ6UWH4 519 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 B3GLCTQ6Y288 498 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 HSDL2Q6YN16 418 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 FAM92BQ6ZTR7 304 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 GPRIN3Q6ZVF9 776 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 DET1Q7L5Y6 550 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 PTAR1Q7Z6K3 402 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 RNF130Q86XS8 419 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 CPNE9Q8IYJ1 553 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 MICU2Q8IYU8 434 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 GCNT2Q8N0V5 402 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 METTL4Q8N3J2 472 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 FBXO39Q8N4B4 442 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 GDPD1Q8N9F7 314 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR56A4Q8NGH8 313 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR5M1Q8NGP8 315 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR1J1Q8NGS3 322 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 TEX47Q8TBZ9 253 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZFAND1Q8TCF1 268 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 RAD51AP1Q96B01 352 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 TADA1Q96BN2 335 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 OTUB1Q96FW1 271 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 CDKN2AIPNLQ96HQ2 116 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 PYURFQ96I23 114 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 PPP3R2Q96LZ3 170 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 COL21A1Q96P44 957 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR6C1Q96RD1 312 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 TRIB3Q96RU7 358 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ATOH8Q96SQ7 321 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZNF382Q96SR6 550 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLC30A2Q9BRI3 323 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 GTPBP2Q9BX10 602 aaKnown RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 CDCA4Q9BXL8 241 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 DGCR6LQ9BY27 220 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 GABARAPL3Q9BY60 117 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 DUSP16Q9BY84 665 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 NLNQ9BYT8 704 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 NMNAT2Q9BZQ4 307 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLC22A4Q9H015 551 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLC25A51Q9H1U9 297 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 DCSTAMPQ9H295 470 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 KCNK15Q9H427 330 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 DPEP2Q9H4A9 486 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ASB8Q9H765 288 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZNF160Q9HCG1 818 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 RAB9BQ9NP90 201 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 NT5MQ9NPB1 228 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 IL1RAPQ9NPH3 570 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ACOXLQ9NUZ1 547 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 GPATCH2LQ9NWQ4 482 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms