RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 OR5T2Q8NGG2 359 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 OR52P1PQ8NH57 321 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 RNF141Q8WVD5 230 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 GTPBP3Q969Y2 492 aaKnown RBP8.52□□□□□ -1.05
SNHG3-201ENST00000413987 MARC2Q969Z3 335 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 TSSK6Q9BXA6 273 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 OR51J1Q9H342 316 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 FGF22Q9HCT0 170 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 B3GAT2Q9NPZ5 323 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 ACER3Q9NUN7 267 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 BTNL2Q9UIR0 455 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 EXO1Q9UQ84 846 aaKnown RBP8.52□□□□□ -1.05
SNHG3-201ENST00000413987 PRELID3BQ9Y3B1 194 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 KLF2Q9Y5W3 355 aaPredicted RBP8.52□□□□□ -1.05
SNHG3-201ENST00000413987 NUBP2Q9Y5Y2 271 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 IGHV1OR15-9A0A0B4J2B8 117 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 MARCH11A6NNE9 402 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 M0R233 179 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 POP7O75817 140 aaKnown RBP8.52□□□□□ -1.05
SNHG3-201ENST00000413987 ACSM4P0C7M7 580 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 OR2T7P0C7T2 308 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 AMD1P17707 334 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 FPR2P25090 351 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 TACR1P25103 407 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 ITGA3P26006 1051 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 GABRA5P31644 462 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 BDKRB1P46663 353 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 CRYBA2P53672 197 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 RAG2P55895 527 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 WNT4P56705 351 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 AP3S2P59780 193 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 ZNF91Q05481 1191 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 SPEM2Q0P670 501 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 P2RY14Q15391 338 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 SPIN4Q56A73 249 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 BCL2L15Q5TBC7 163 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 NOXRED1Q6NXP6 359 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 PRSS57Q6UWY2 283 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 OR11H7Q8NGC8 314 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 OR6M1Q8NGM8 313 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 ABHD5Q8WTS1 349 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 RAB40AQ8WXH6 277 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 HSD17B8Q92506 261 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 TM9SF4Q92544 642 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 EMG1Q92979 244 aaKnown RBP8.52□□□□□ -1.05
SNHG3-201ENST00000413987 TSACCQ96A04 125 aaPredicted RBP8.52□□□□□ -1.05
SNHG3-201ENST00000413987 FCRL1Q96LA6 429 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 BMFQ96LC9 184 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 TECTBQ96PL2 329 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 IL4I1Q96RQ9 567 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 TEX101Q9BY14 249 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 ZNF436Q9C0F3 470 aaPredicted RBP8.52□□□□□ -1.05
SNHG3-201ENST00000413987 DPAGT1Q9H3H5 408 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 SDHAF2Q9NX18 166 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 COPZ2Q9P299 210 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 ABI3Q9P2A4 366 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 RHCGQ9UBD6 479 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 SLC6A14Q9UN76 642 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 UBE2J1Q9Y385 318 aaPredicted RBP8.52□□□□□ -1.05
SNHG3-201ENST00000413987 SPIN1Q9Y657 262 aaPredicted RBP8.52□□□□□ -1.05
SNHG3-201ENST00000413987 DSPPQ9NZW4 1301 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 MEIKINA0A087WXM9 373 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 TRDV1A0A1B0GX56 115 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 MGAT4DA6NG13 374 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 KIAA1324LA8MWY0 1029 aaPredicted RBP8.51□□□□□ -1.05
SNHG3-201ENST00000413987 H0YIG0 161 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 NDUFS4O43181 175 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 CEACAM5P06731 702 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 BCKDHBP21953 392 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 XCR1P46094 333 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 AP1S2P56377 157 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 SEC61GP60059 68 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 ZXDAP98168 799 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 EXT1Q16394 746 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 CPSF6Q16630 551 aaKnown RBP eCLIP8.51□□□□□ -1.057e-16■■■■■ 39.3
SNHG3-201ENST00000413987 ZNF750Q32MQ0 723 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 ZNF658BQ4V348 819 aaPredicted RBP8.51□□□□□ -1.05
SNHG3-201ENST00000413987 SLC25A30Q5SVS4 291 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 C12orf73Q69YU5 71 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 BHLHB9Q6PI77 547 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 UBALD2Q8IYN6 164 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 SLC22A18ASQ8N1D0 253 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 GTPBP8Q8N3Z3 284 aaPredicted RBP8.51□□□□□ -1.05
SNHG3-201ENST00000413987 MS4A15Q8N5U1 240 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 OR11H4Q8NGC9 324 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 OR5D18Q8NGL1 313 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 CCL4L1Q8NHW4 92 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 UBL7Q96S82 380 aaPredicted RBP8.51□□□□□ -1.05
SNHG3-201ENST00000413987 ATF6BQ99941 703 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 ZNF559Q9BR84 538 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 APOOQ9BUR5 198 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 HIPK2Q9H2X6 1198 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 PLEK2Q9NYT0 353 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 ZNF282Q9UDV7 671 aaPredicted RBP8.51□□□□□ -1.05
SNHG3-201ENST00000413987 ENPP4Q9Y6X5 453 aa8.51□□□□□ -1.05
SNHG3-201ENST00000413987 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.5□□□□□ -1.05
SNHG3-201ENST00000413987 A0A0U1RRA0 63 aa8.5□□□□□ -1.05
SNHG3-201ENST00000413987 TMEM129A0AVI4 362 aa8.5□□□□□ -1.05
SNHG3-201ENST00000413987 PRR19A6NJB7 356 aa8.5□□□□□ -1.05
SNHG3-201ENST00000413987 UGDHO60701 494 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms