RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 THBS4P35443 961 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 MNAT1P51948 309 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 CTXN1P60606 82 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 RAP1BP61224 184 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 RPL27P61353 136 aaKnown RBP13.58□□□□□ -0.24
MCF2L-211ENST00000413354 RAP1AP62834 184 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 PPP2R2BQ00005 443 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 MYBPC1Q00872 1141 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 CD47Q08722 323 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 DGCR6Q14129 220 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 KRT72Q14CN4 511 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 LAPTM4AQ15012 233 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 SPATS1Q496A3 300 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 KRT80Q6KB66 452 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 SLC16A14Q7RTX9 510 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 ANKS4BQ8N8V4 417 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 FAM156AQ8NDB6 213 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 OR10H5Q8NGA6 315 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 OR4K5Q8NGD3 323 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 FAM168AQ92567 244 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 MS4A3Q96HJ5 214 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 KCNN2Q9H2S1 579 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 RNF121Q9H920 327 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 NMNAT1Q9HAN9 279 aaPredicted RBP13.58□□□□□ -0.24
MCF2L-211ENST00000413354 CMAHPQ9Y471 501 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 FN1P02751 2386 aaKnown RBP13.58□□□□□ -0.24
MCF2L-211ENST00000413354 NIPBLQ6KC79 2804 aaeCLIP13.58□□□□□ -0.24
MCF2L-211ENST00000413354 ZANQ9Y493 2812 aa13.58□□□□□ -0.24
MCF2L-211ENST00000413354 TRAV27A0A087WT01 109 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 F12P00748 615 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-211ENST00000413354 TP53P04637 393 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-211ENST00000413354 ZNF35P13682 527 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 HOXB4P17483 251 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-211ENST00000413354 MRPS34P82930 218 aaKnown RBP13.57□□□□□ -0.24
MCF2L-211ENST00000413354 MXRA7P84157 204 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 RAB39AQ14964 217 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 FXNQ16595 210 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 FGD3Q5JSP0 725 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 GKAP1Q5VSY0 366 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-211ENST00000413354 TMPRSS11FQ6ZWK6 438 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 ZNF525Q8N782 197 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 RNF148Q8N7C7 305 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 RBM15BQ8NDT2 890 aaKnown RBP13.57□□□□□ -0.24
MCF2L-211ENST00000413354 OR13C2Q8NGS9 318 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 OR51A7Q8NH64 312 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 HTRA1Q92743 480 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 HDAC2Q92769 488 aaKnown RBP13.57□□□□□ -0.24
MCF2L-211ENST00000413354 SORCS2Q96PQ0 1159 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 RBP7Q96R05 134 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 KCNK17Q96T54 332 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 SH3GL3Q99963 347 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 VRK1Q99986 396 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-211ENST00000413354 RAB1BQ9H0U4 201 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 NDUFAF4Q9P032 175 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 SLC7A8Q9UHI5 535 aa13.57□□□□□ -0.24
MCF2L-211ENST00000413354 IGHV4-30-2A0A087WSY4 118 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 SLC22A23A1A5C7 686 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 TCN1P20061 433 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-211ENST00000413354 GLRXP35754 106 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 GUCA1AP43080 201 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-211ENST00000413354 GPR4P46093 362 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 EVX1P49640 407 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 PDLIM4P50479 330 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 SMIM11AP58511 58 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 LSM11P83369 360 aaKnown RBP eCLIP13.56□□□□□ -0.24
MCF2L-211ENST00000413354 PLP2Q04941 152 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 TBC1D28Q2M2D7 210 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 THEM4Q5T1C6 240 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 LRRC75AQ8NAA5 344 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 SLC30A7Q8NEW0 376 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 OR1J2Q8NGS2 313 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 SLC7A13Q8TCU3 470 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 MCUR1Q96AQ8 359 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 NMD3Q96D46 503 aaKnown RBP13.56□□□□□ -0.24
MCF2L-211ENST00000413354 NSMCE2Q96MF7 247 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 LRMDAQ9H2I8 198 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 SIAEQ9HAT2 523 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 CDH20Q9HBT6 801 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 DYNLRB1Q9NP97 96 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 CCNB1IP1Q9NPC3 277 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 ARL8BQ9NVJ2 186 aa13.56□□□□□ -0.24
MCF2L-211ENST00000413354 YLPM1P49750 1951 aaKnown RBP13.56□□□□□ -0.24
MCF2L-211ENST00000413354 IQCMA0A1B0GVH7 501 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 NDUFS8O00217 210 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 SLC2A10O95528 541 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 PATE4P0C8F1 98 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 FUT4P22083 530 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 RPL4P36578 427 aaKnown RBP13.55□□□□□ -0.24
MCF2L-211ENST00000413354 VLDLRP98155 873 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 HSF2Q03933 536 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 ZBED5Q49AG3 693 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 PODNL1Q6PEZ8 512 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 TBPL2Q6SJ96 375 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 IGFN1Q86VF2 1251 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 DEFB107AQ8IZN7 70 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 SVOPLQ8N434 492 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 MAPK1IP1LQ8NDC0 245 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 FGFBP3Q8TAT2 258 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 ZNF519Q8TB69 540 aa13.55□□□□□ -0.24
MCF2L-211ENST00000413354 C10orf105Q8TEF2 133 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms