RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 NPIPA1Q9UND3 350 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 STUB1Q9UNE7 303 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 RASD1Q9Y272 281 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 AHCTF1Q8WYP5 2266 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 EIF1BO60739 113 aaKnown RBP4.93□□□□□ -1.62
EPHA4-202ENST00000409854 GPX5O75715 221 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 GAAP10253 952 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 SDHBP21912 280 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 NR4A1P22736 598 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 GDF1P27539 372 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 VBP1P61758 197 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 NCS1P62166 190 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 ACTA2P62736 377 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 ACTG2P63267 376 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 TSC22D1Q15714 1073 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 HIST3H3Q16695 136 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 LYPD4Q6UWN0 246 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 IDO2Q6ZQW0 420 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 HDDC2Q7Z4H3 204 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 YRDCQ86U90 279 aaKnown RBP4.93□□□□□ -1.62
EPHA4-202ENST00000409854 UEVLDQ8IX04 471 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 GHDCQ8N2G8 530 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 KDM8Q8N371 416 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 ZFP62Q8NB50 900 aaPredicted RBP4.93□□□□□ -1.62
EPHA4-202ENST00000409854 OR14L1PQ8NHC6 308 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 NDNFQ8TB73 568 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 PHF3Q92576 2039 aaKnown RBP4.93□□□□□ -1.62
EPHA4-202ENST00000409854 UFD1Q92890 307 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 C12orf4Q9NQ89 552 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 BABAM2Q9NXR7 383 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 B4GALT7Q9UBV7 327 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 KCNN3Q9UGI6 736 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 KLK13Q9UKR3 277 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 COPS3Q9UNS2 423 aa4.93□□□□□ -1.62
EPHA4-202ENST00000409854 EFSO43281 561 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 RAMP1O60894 148 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SERPINI2O75830 405 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 VAMP5O95183 116 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 MT-ND5P03915 603 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 OPN1LWP04000 364 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 CD1AP06126 327 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 PGA4P0DJD7 388 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 PGA3P0DJD8 388 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 PRKAR1AP10644 381 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 CTLA4P16410 223 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 ZNF182P17025 639 aaPredicted RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 GALP22466 123 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 CRABP1P29762 137 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 GABRA5P31644 462 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 NAA10P41227 235 aaPredicted RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 WIPI1Q5MNZ9 446 aaPredicted RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 LIPKQ5VXJ0 399 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 ESPNLQ6ZVH7 1005 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 VASH1Q7L8A9 365 aaPredicted RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 OR6K6Q8NGW6 343 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 OR6X1Q8NH79 312 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 TXNDC15Q96J42 360 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 ADAD1Q96M93 576 aaKnown RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 TBX5Q99593 518 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 COQ7Q99807 217 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 DCUN1D5Q9BTE7 237 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SRXN1Q9BYN0 137 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 PLGRKTQ9HBL7 147 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 MED29Q9NX70 200 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 KLRC4-KLRK1H3BQV0 150 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 TNFSF11O14788 317 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 TMCC2O75069 709 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 PSKH1P11801 424 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 RAC2P15153 192 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 CD46P15529 392 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 KLK2P20151 261 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 PSMA1P25786 263 aaKnown RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 FGF9P31371 208 aaPredicted RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 TGFBR1P36897 503 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 MEOX1P50221 254 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 TNFSF10P50591 281 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 ZNF133P52736 654 aaPredicted RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 BIDP55957 195 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 CLDN15P56746 228 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 TAS2R43P59537 309 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 RAC3P60763 192 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 PCK2Q16822 640 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 ABLIM2Q6H8Q1 611 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 LINC00299Q6ZSB3 139 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 USP43Q70EL4 1123 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 KLBQ86Z14 1044 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 ZNF511Q8NB15 262 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 NOXO1Q8NFA2 376 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 FDCSPQ8NFU4 85 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 OR10Z1Q8NGY1 313 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SMAP2Q8WU79 429 aaPredicted RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SLC39A7Q92504 469 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 RNF166Q96A37 237 aaPredicted RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 TRMT61AQ96FX7 289 aaKnown RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 C4orf36Q96KX1 117 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SFXN2Q96NB2 322 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 INTS14Q96SY0 518 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 NAA11Q9BSU3 229 aaPredicted RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SF3B5Q9BWJ5 86 aaKnown RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SRA1Q9HD15 236 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms