RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 ICAM2P13598 275 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 ZNF28P17035 718 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 RAB3BP20337 219 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 AHCYP23526 432 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 APEX1P27695 318 aaKnown RBP6.73□□□□□ -1.33
CXCR4-202ENST00000409817 SHC1P29353 583 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 PTGDSP41222 190 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 FOLR3P41439 243 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 CASP3P42574 277 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 FOXL2P58012 376 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 GLO1Q04760 184 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 RASGEF1BQ0VAM2 473 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 ASAH1Q13510 395 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 PLPPR5Q32ZL2 321 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 C1QL3Q5VWW1 255 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 C3orf33Q6P1S2 294 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 CNIH2Q6PI25 160 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 RPTNQ6XPR3 784 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 C16orf47Q6ZP98 133 aaPredicted RBP6.73□□□□□ -1.33
CXCR4-202ENST00000409817 NDUFAF7Q7L592 441 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 RFLNBQ8N5W9 214 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 FADS6Q8N9I5 356 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 OR10G3Q8NGC4 313 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 OTOSQ8NHW6 89 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 ZBTB8AQ96BR9 441 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 C8orf44Q96CB5 159 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 C1orf159Q96HA4 380 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 PPP1R3EQ9H7J1 279 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 GALNT9Q9HCQ5 603 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 CHST11Q9NPF2 352 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 MED11Q9P086 117 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 PISDQ9UG56 409 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 TEKT2Q9UIF3 430 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 B9D1Q9UPM9 204 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 GRIP1Q9Y3R0 1128 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 SLC22A23A1A5C7 686 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 LIPT2A6NK58 231 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 TMEM212A6NML5 194 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 C17orf51A8MQB3 221 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 NPIPA5E9PKD4 350 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 DCTN6O00399 190 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 ITGA10O75578 1167 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 UPK3AO75631 287 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 ABHD16AO95870 558 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 RAF1P04049 648 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 RAB40ALP0C0E4 278 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 RBMS1P29558 406 aaKnown RBP6.73□□□□□ -1.33
CXCR4-202ENST00000409817 HCCSP53701 268 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 CAV3P56539 151 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 RPS11P62280 158 aaKnown RBP eCLIP6.73□□□□□ -1.33
CXCR4-202ENST00000409817 SUMO1P63165 101 aaKnown RBP6.73□□□□□ -1.33
CXCR4-202ENST00000409817 FOXF1Q12946 379 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 SELENBP1Q13228 472 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 ALKBH1Q13686 389 aaKnown RBP6.73□□□□□ -1.33
CXCR4-202ENST00000409817 INSL4Q14641 139 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 ZNF239Q16600 458 aaKnown RBP6.73□□□□□ -1.33
CXCR4-202ENST00000409817 HSD17B12Q53GQ0 312 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 PYDC2Q56P42 97 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 IDNKQ5T6J7 187 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 HACD4Q5VWC8 232 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 LIPNQ5VXI9 398 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 SLC18B1Q6NT16 456 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 KCTD18Q6PI47 426 aaPredicted RBP6.73□□□□□ -1.33
CXCR4-202ENST00000409817 BAIAP2L2Q6UXY1 529 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 PRR23CQ6ZRP0 262 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 PM20D2Q8IYS1 436 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 GHDCQ8N2G8 530 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 YIPF7Q8N8F6 280 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 OR2M3Q8NG83 312 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 OR6N2Q8NGY6 317 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 SMAP2Q8WU79 429 aaPredicted RBP6.73□□□□□ -1.33
CXCR4-202ENST00000409817 CHAC2Q8WUX2 184 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 TSSK2Q96PF2 358 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 MESP1Q9BRJ9 268 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 DDA1Q9BW61 102 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 SSBP4Q9BWG4 385 aaPredicted RBP6.73□□□□□ -1.33
CXCR4-202ENST00000409817 OR11A1Q9GZK7 315 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 SLC22A4Q9H015 551 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 COMMD4Q9H0A8 199 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 ARRDC1-AS1Q9H2J1 176 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 POLE4Q9NR33 117 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 CYSLTR2Q9NS75 346 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 C14orf119Q9NWQ9 140 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 GFOD1Q9NXC2 390 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 NPAP1Q9NZP6 1156 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 PADI1Q9ULC6 663 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 NPIPA1Q9UND3 350 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 RPH3AQ9Y2J0 694 aaPredicted RBP6.73□□□□□ -1.33
CXCR4-202ENST00000409817 HS3ST3B1Q9Y662 390 aa6.73□□□□□ -1.33
CXCR4-202ENST00000409817 CHCHD2Q9Y6H1 151 aaPredicted RBP6.73□□□□□ -1.33
CXCR4-202ENST00000409817 ZDBF2Q9HCK1 2354 aa6.72□□□□□ -1.33
CXCR4-202ENST00000409817 NSG1A0A0A6YYJ2 146 aa6.72□□□□□ -1.33
CXCR4-202ENST00000409817 IGLV1-36A0A0B4J1U3 117 aa6.72□□□□□ -1.33
CXCR4-202ENST00000409817 A0A0G2JK05 382 aa6.72□□□□□ -1.33
CXCR4-202ENST00000409817 A0A1W2PQ09 198 aa6.72□□□□□ -1.33
CXCR4-202ENST00000409817 MS4A18H0YCH9 400 aa6.72□□□□□ -1.33
CXCR4-202ENST00000409817 HPGDSO60760 199 aa6.72□□□□□ -1.33
CXCR4-202ENST00000409817 HRGP04196 525 aa6.72□□□□□ -1.33
CXCR4-202ENST00000409817 CSF3P09919 207 aa6.72□□□□□ -1.33
CXCR4-202ENST00000409817 SLC2A2P11168 524 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms