RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 FPR3P25089 353 aa27.09■■□□□ 1.93
TRAF3IP1-203ENST00000409739 IFNGR2P38484 337 aa27.09■■□□□ 1.93
TRAF3IP1-203ENST00000409739 NAAAQ02083 359 aa27.09■■□□□ 1.93
TRAF3IP1-203ENST00000409739 FLOT2Q14254 428 aa27.09■■□□□ 1.93
TRAF3IP1-203ENST00000409739 GSG1Q2KHT4 349 aa27.09■■□□□ 1.93
TRAF3IP1-203ENST00000409739 VNN3Q9NY84 501 aa27.09■■□□□ 1.93
TRAF3IP1-203ENST00000409739 GRHPRQ9UBQ7 328 aa27.09■■□□□ 1.93
TRAF3IP1-203ENST00000409739 IL20RAQ9UHF4 553 aa27.09■■□□□ 1.93
TRAF3IP1-203ENST00000409739 POMPQ9Y244 141 aa27.09■■□□□ 1.93
TRAF3IP1-203ENST00000409739 PIGFQ07326 219 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 MESTQ5EB52 335 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 OR2T5Q6IEZ7 315 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 C1orf94Q6P1W5 598 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 PGBD2Q6P3X8 592 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 SLC25A47Q6Q0C1 308 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 OR2T29Q8NH02 315 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 FANK1Q8TC84 345 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 CANT1Q8WVQ1 401 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 ZNF75AQ96N20 296 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 ZNF570Q96NI8 536 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 DHRS9Q9BPW9 319 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 KCNS3Q9BQ31 491 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 NRIP3Q9NQ35 241 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 UGT2A1Q9Y4X1 527 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 ATP23Q9Y6H3 246 aa27.08■■□□□ 1.93
TRAF3IP1-203ENST00000409739 ARFGEF3Q5TH69 2177 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 DHRS12A0PJE2 317 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 H7C1C5 153 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 ARHGEF9O43307 516 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 TMCC2O75069 709 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 ENTPD5O75356 428 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 UBL3O95164 117 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 CRYAAP02489 173 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 CALCRP30988 508 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 GSSP48637 474 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 RASSF2P50749 326 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 LCN6P62502 163 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 NRN1LQ496H8 165 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 THEM4Q5T1C6 240 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 SMARCD3Q6STE5 483 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 LRRC75A-AS1Q8N1F1 130 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 OR9Q2Q8NGE9 314 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 FGFBP3Q8TAT2 258 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 FNDC8Q8TC99 324 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 NSMAFQ92636 917 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 RASD2Q96D21 266 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 SH3GL3Q99963 347 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 CXorf56Q9H5V9 222 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 FAIMQ9NVQ4 179 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 SLC7A8Q9UHI5 535 aa27.07■■□□□ 1.92
TRAF3IP1-203ENST00000409739 VPS13CQ709C8 3753 aa27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 ATP5HO75947 161 aa27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 FARS2O95363 451 aaKnown RBP27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 PATE4P0C8F1 98 aa27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 SDHAP31040 664 aa27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 GIPRP48546 466 aa27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 PTDSS1P48651 473 aaKnown RBP27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 PPP1R8Q12972 351 aaKnown RBP27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 KRR1Q13601 381 aaKnown RBP27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 DTX2Q86UW9 622 aa27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 KRTAP1-3Q8IUG1 177 aa27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 LURAP1LQ8IV03 231 aa27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 GNPDA2Q8TDQ7 276 aa27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 RBP7Q96R05 134 aa27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 TRAF4Q9BUZ4 470 aaPredicted RBP27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 OR52D1Q9H346 318 aa27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 REEP1Q9H902 201 aa27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 SAMHD1Q9Y3Z3 626 aaKnown RBP27.06■■□□□ 1.92
TRAF3IP1-203ENST00000409739 TEX13CA0A0J9YWL9 993 aa27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 ZNF14P17017 642 aaPredicted RBP27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 CDAP32320 146 aa27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 RAB1AP62820 205 aa27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 TSPAN31Q12999 210 aa27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 GPR139Q6DWJ6 353 aa27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 DPY19L2P2Q6ZN68 376 aa27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 SPATA24Q86W54 205 aa27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 PERPQ96FX8 193 aa27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 MS4A3Q96HJ5 214 aa27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 CHID1Q9BWS9 393 aa27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 GSX2Q9BZM3 304 aa27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 DENND2DQ9H6A0 471 aaPredicted RBP27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 U3KQV3 271 aa27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 RTTNQ86VV8 2226 aa27.05■■□□□ 1.92
TRAF3IP1-203ENST00000409739 IGHV2OR16-5A0A0B4J2B6 119 aa27.04■■□□□ 1.92
TRAF3IP1-203ENST00000409739 OVOL3O00110 214 aa27.04■■□□□ 1.92
TRAF3IP1-203ENST00000409739 XKRYO14609 159 aa27.04■■□□□ 1.92
TRAF3IP1-203ENST00000409739 RAB36O95755 333 aa27.04■■□□□ 1.92
TRAF3IP1-203ENST00000409739 CD8AP01732 235 aa27.04■■□□□ 1.92
TRAF3IP1-203ENST00000409739 TTKP33981 857 aa27.04■■□□□ 1.92
TRAF3IP1-203ENST00000409739 PTH2RP49190 550 aa27.04■■□□□ 1.92
TRAF3IP1-203ENST00000409739 MRPS34P82930 218 aaKnown RBP27.04■■□□□ 1.92
TRAF3IP1-203ENST00000409739 ZNF770Q6IQ21 691 aaPredicted RBP27.04■■□□□ 1.92
TRAF3IP1-203ENST00000409739 LINC00471Q8N535 108 aa27.04■■□□□ 1.92
TRAF3IP1-203ENST00000409739 NABP1Q96AH0 204 aa27.04■■□□□ 1.92
TRAF3IP1-203ENST00000409739 ZNF701Q9NV72 531 aaPredicted RBP27.04■■□□□ 1.92
TRAF3IP1-203ENST00000409739 IER3IP1Q9Y5U9 82 aa27.04■■□□□ 1.92
TRAF3IP1-203ENST00000409739 TCRBV3S1A0A5B6 114 aa27.03■■□□□ 1.92
TRAF3IP1-203ENST00000409739 CCNB2O95067 398 aa27.03■■□□□ 1.92
TRAF3IP1-203ENST00000409739 PAX1P15863 534 aa27.03■■□□□ 1.92
TRAF3IP1-203ENST00000409739 NKX6-1P78426 367 aaPredicted RBP27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms