RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SEC61A2Q9H9S3 476 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 LPAR3Q9UBY5 353 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 RPS6KA6Q9UK32 745 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 CDC42EP3Q9UKI2 254 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 A4GNTQ9UNA3 340 aa12.55□□□□□ -0.4
NIF3L1-205ENST00000409588 JMJD1CQ15652 2540 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 IQCMA0A1B0GVH7 501 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 AHCYL1O43865 530 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 GMNNO75496 209 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 SEC14L2O76054 403 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 SNAP29O95721 258 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 F13BP05160 661 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 PRDX6P30041 224 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 AQP2P41181 271 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 MRPS34P82930 218 aaKnown RBP12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 PRKCDQ05655 676 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 SF3A3Q12874 501 aaKnown RBP eCLIP12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 FXNQ16595 210 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 CHRFAM7AQ494W8 412 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 IFI44LQ53G44 452 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 ALG10Q5BKT4 473 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 ARMC4Q5T2S8 1044 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 KRT80Q6KB66 452 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 PODNL1Q6PEZ8 512 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 FKBP9P1Q75LS8 142 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 SLC16A14Q7RTX9 510 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 MYPOPQ86VE0 399 aaPredicted RBP12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 SVOPLQ8N434 492 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 POU5F2Q8N7G0 328 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 PFN4Q8NHR9 129 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 HTRA1Q92743 480 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 HPS1Q92902 700 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 WACQ9BTA9 647 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 ALG12Q9BV10 488 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 NDEL1Q9GZM8 345 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 RNF121Q9H920 327 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 DYNLRB1Q9NP97 96 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 C20orf141Q9NUB4 165 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 ZNF346Q9UL40 294 aaKnown RBP12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 ARFGEF3Q5TH69 2177 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 ABCA1O95477 2261 aa12.54□□□□□ -0.4
NIF3L1-205ENST00000409588 A6NIZ1 184 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 GPRIN2O60269 458 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 TRMUO75648 421 aaKnown RBP12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 IGHMP01871 453 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 IFI30P13284 250 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 DAOP14920 347 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 TNFRSF1BP20333 461 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 RAP1BP61224 184 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 RAP1AP62834 184 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 MRPS11P82912 194 aaKnown RBP12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 MELKQ14680 651 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 RAB39AQ14964 217 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 C6orf52Q5T4I8 152 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 BRICD5Q6PL45 260 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 PRIMA1Q86XR5 153 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 WDFY1Q8IWB7 410 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 FAM156AQ8NDB6 213 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 SLC30A7Q8NEW0 376 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 NOXO1Q8NFA2 376 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 OR4K5Q8NGD3 323 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 UBASH3BQ8TF42 649 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 ACOT11Q8WXI4 607 aaPredicted RBP12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 FOXN4Q96NZ1 517 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 BCL2L14Q9BZR8 327 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 NSRP1Q9H0G5 558 aaKnown RBP12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 ABCD2Q9UBJ2 740 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 REV1Q9UBZ9 1251 aa12.53□□□□□ -0.4
NIF3L1-205ENST00000409588 M0R233 179 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 NME4O00746 187 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 SHOX2O60902 331 aaPredicted RBP12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 STAMBPO95630 424 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 ZNF682O95780 498 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 ADRA2AP08913 450 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 SAGP10523 405 aaPredicted RBP12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 THBS2P35442 1172 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 SLC7A2P52569 658 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 RPL27P61353 136 aaKnown RBP12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 PCBD1P61457 104 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 TBC1D28Q2M2D7 210 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 IQCCQ4KMZ1 466 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 FAM27BQ5VT28 67 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 TMPRSS11FQ6ZWK6 438 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 MBOAT2Q6ZWT7 520 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 OAFQ86UD1 273 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 ZNF584Q8IVC4 421 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 ALDH16A1Q8IZ83 802 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 ANKS4BQ8N8V4 417 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 SYT14Q8NB59 555 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 RBM15BQ8NDT2 890 aaKnown RBP12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 ZNF519Q8TB69 540 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 C11orf40Q8WZ69 217 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 ZNF347Q96SE7 839 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 SH3GL3Q99963 347 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 KCTD14Q9BQ13 255 aaPredicted RBP12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 MYLK2Q9H1R3 596 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 SPAG4Q9NPE6 437 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 SLCO1C1Q9NYB5 712 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 TMEM5Q9Y2B1 443 aa12.52□□□□□ -0.41
NIF3L1-205ENST00000409588 FAM32AQ9Y421 112 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms