RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 IGKV1D-42A0A075B6H8 117 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 OR6C70A6NIJ9 312 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 CENPBD1B2RD01 187 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 XKRYO14609 159 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 HCRTR2O43614 444 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 OR6A2O95222 327 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 UCHL1P09936 223 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 NAGAP17050 411 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 HLA-DMAP28067 261 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 TACR3P29371 465 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 UQCRC1P31930 480 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 PITPNBP48739 271 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 MAP2K6P52564 334 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 SUMO3P55854 103 aaPredicted RBP11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 SLC26A5P58743 744 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 SELENBP1Q13228 472 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 NDUFAF6Q330K2 333 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 HSD17B12Q53GQ0 312 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 TMEM205Q6UW68 189 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 UNQ9370/PRO34162Q6UXP9 181 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 B3GLCTQ6Y288 498 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 LANCL3Q6ZV70 420 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 PPP1R32Q7Z5V6 425 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 ANKRD37Q7Z713 158 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 MCEMP1Q8IX19 187 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 FDCSPQ8NFU4 85 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 OR5L2Q8NGL0 311 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 OR6K6Q8NGW6 343 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 ADAMTS17Q8TE56 1095 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 PNPLA2Q96AD5 504 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 C8orf44Q96CB5 159 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 OMA1Q96E52 524 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 PGLYRP3Q96LB9 341 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 IP6K3Q96PC2 410 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 NMNAT3Q96T66 252 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 KCNJ15Q99712 375 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 C7orf50Q9BRJ6 194 aaKnown RBP11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 ZCCHC4Q9H5U6 513 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 KLHL1Q9NR64 748 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 RYDENQ9NUL5 291 aaKnown RBP11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 C19orf25Q9UFG5 118 aaPredicted RBP11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 GNG8Q9UK08 70 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 ZNF281Q9Y2X9 895 aa11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 DIDO1Q9BTC0 2240 aaKnown RBP11.62□□□□□ -0.55
SMARCB1-203ENST00000407082 CSMD1Q96PZ7 3565 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 IGHV3-20A0A0C4DH32 117 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 TEX13CA0A0J9YWL9 993 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 FAM240BA0A1B0GVZ2 78 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 MEIOCA2RUB1 952 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 A8MVM7 634 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 ORC5O43913 435 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 ICOSLGO75144 302 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 TPPPO94811 219 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 NUDT14O95848 222 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 GYPBP06028 91 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 CLUP10909 449 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 ACVR1BP36896 505 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 DDOSTP39656 456 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 AQP2P41181 271 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 RFX2P48378 723 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 CAV3P56539 151 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 EGR3Q06889 387 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 CD226Q15762 336 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 PLEKHN1Q494U1 663 aaPredicted RBP11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 TP53I3Q53FA7 332 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 ZNF57Q68EA5 555 aaPredicted RBP11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 FAM122BQ7Z309 247 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 GRINAQ7Z429 371 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 CPEB2Q7Z5Q1 589 aaKnown RBP11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 CDH24Q86UP0 819 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 LRRC17Q8N6Y2 441 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 RBMXL3Q8N7X1 1067 aaKnown RBP11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 LRRC75AQ8NAA5 344 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 GATSQ8NAP1 163 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 OR11G2Q8NGC1 345 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 ASB17Q8WXJ9 295 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 RFT1Q96AA3 541 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 ARSGQ96EG1 525 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 PELI1Q96FA3 418 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 KLHL15Q96M94 604 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 HDHD2Q9H0R4 259 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 SDHAF3Q9NRP4 125 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 P4HTMQ9NXG6 502 aa11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 SIRT4Q9Y6E7 314 aaPredicted RBP11.61□□□□□ -0.55
SMARCB1-203ENST00000407082 HEATR5AQ86XA9 2040 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 LOC102723996A0A087X1L8 192 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 OR6C68A6NDL8 312 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 PRSS44E7EML9 344 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 LYRM1O43325 122 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 SLC43A1O75387 559 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 AHSA1O95433 338 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 TFP02787 698 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 MSX1P28360 303 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 NAA10P41227 235 aaPredicted RBP11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 ZNF117Q03924 483 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 C17orf67Q0P5P2 114 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 SGCBQ16585 318 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 NDUFA5Q16718 116 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 NDUFAF7Q7L592 441 aa11.6□□□□□ -0.55
SMARCB1-203ENST00000407082 C9orf40Q8IXQ3 194 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms