RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 FANCFQ9NPI8 374 aa7.38□□□□□ -1.23
GPC3-203ENST00000406757 RPRD1BQ9NQG5 326 aaKnown RBP7.38□□□□□ -1.23
GPC3-203ENST00000406757 CMC2Q9NRP2 79 aa7.38□□□□□ -1.23
GPC3-203ENST00000406757 KLHL9Q9P2J3 617 aa7.38□□□□□ -1.23
GPC3-203ENST00000406757 PRSS50Q9UI38 385 aa7.38□□□□□ -1.23
GPC3-203ENST00000406757 KLHL21Q9UJP4 597 aa7.38□□□□□ -1.23
GPC3-203ENST00000406757 BAIAP2Q9UQB8 552 aa7.38□□□□□ -1.23
GPC3-203ENST00000406757 MEMO1Q9Y316 297 aa7.38□□□□□ -1.23
GPC3-203ENST00000406757 LRRC42Q9Y546 428 aa7.38□□□□□ -1.23
GPC3-203ENST00000406757 IGKV3D-15A0A087WSY6 115 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 SLC22A23A1A5C7 686 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 PRSS37A4D1T9 235 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 SH3D21A4FU49 640 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 MBD3L4A6NDZ8 208 aaPredicted RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 MBD3L3A6NE82 208 aaPredicted RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 MBD3L5A6NJ08 208 aaPredicted RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 RIIAD1A6NNX1 92 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 PRR23D1E9PI22 279 aaPredicted RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 XKRYO14609 159 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 DENRO43583 198 aaKnown RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 IDH3BO43837 385 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 SLC16A7O60669 478 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 MRPL33O75394 65 aaKnown RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 WBP4O75554 376 aaKnown RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 ZNF432O94892 652 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 APOL3O95236 402 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 MPZL1O95297 269 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 RENP00797 406 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 IFNGP01579 166 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 QDPRP09417 244 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 PGA4P0DJD7 388 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 PGA3P0DJD8 388 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 PRR23D2P0DMB1 279 aaPredicted RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 TMIGD3P0DMS9 266 aaPredicted RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 APEHP13798 732 aaKnown RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 GABRB1P18505 474 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 MYF6P23409 242 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 AGTR1P30556 359 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 KIR2DL2P43627 348 aaPredicted RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 HSPA13P48723 471 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 CSNK1A1P48729 337 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 SLC16A1P53985 500 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 EFNB1P98172 346 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 CDK5R2Q13319 367 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 MAD2L1BPQ15013 274 aaPredicted RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 PDK3Q15120 406 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 RNPS1Q15287 305 aaKnown RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 TSPO2Q5TGU0 170 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 GPR139Q6DWJ6 353 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 LRFN4Q6PJG9 635 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 LYPD4Q6UWN0 246 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 LINGO2Q7L985 606 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 CXXC5Q7LFL8 322 aaKnown RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 BTLAQ7Z6A9 289 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 THAP5Q7Z6K1 395 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 ZNF100Q8IYN0 542 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 DEPDC4Q8N2C3 294 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 UBE2J2Q8N2K1 259 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 OR6X1Q8NH79 312 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 RHOXF1Q8NHV9 184 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 MBD3L2Q8NHZ7 208 aaPredicted RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 ZNF566Q969W8 418 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 ZNF837Q96EG3 531 aaPredicted RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 SLC25A44Q96H78 314 aaPredicted RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 GMPPAQ96IJ6 420 aaPredicted RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 LRR1Q96L50 414 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 TEX12Q9BXU0 123 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 ANKRD60Q9BZ19 345 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 NUAK2Q9H093 628 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 OPN3Q9H1Y3 402 aaPredicted RBP7.37□□□□□ -1.23
GPC3-203ENST00000406757 SYT4Q9H2B2 425 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 BCO1Q9HAY6 547 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 ASB6Q9NWX5 421 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 B9D1Q9UPM9 204 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 ALPK2Q86TB3 2170 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 MED12LQ86YW9 2145 aa7.37□□□□□ -1.23
GPC3-203ENST00000406757 A0A0G2JNJ9 132 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 TVP23AA6NH52 213 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 A6NIZ1 184 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 ZNF724A8MTY0 619 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 GPR171O14626 319 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 XPNPEP2O43895 674 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 SS18L1O75177 396 aaPredicted RBP7.36□□□□□ -1.23
GPC3-203ENST00000406757 SLC43A1O75387 559 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 KRT33AO76009 404 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 SEC14L2O76054 403 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 IL2RAP01589 272 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 IGHG1P01857 330 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 SCG5P05408 212 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 MRPL3P09001 348 aaKnown RBP7.36□□□□□ -1.23
GPC3-203ENST00000406757 FCGR2AP12318 317 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 CTLA4P16410 223 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 ZNF3P17036 446 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 SPI1P17947 270 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 CDAP32320 146 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 HCCSP53701 268 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 RAP1BP61224 184 aa7.36□□□□□ -1.23
GPC3-203ENST00000406757 RPS7P62081 194 aaKnown RBP7.36□□□□□ -1.23
GPC3-203ENST00000406757 SNRPGP62308 76 aaKnown RBP7.36□□□□□ -1.23
GPC3-203ENST00000406757 RAP1AP62834 184 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms