RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 OR51A7Q8NH64 312 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 NEU4Q8WWR8 484 aaPredicted RBP11.48□□□□□ -0.57
SDF4-203ENST00000403997 HDAC2Q92769 488 aaKnown RBP11.48□□□□□ -0.57
SDF4-203ENST00000403997 MRPL24Q96A35 216 aaKnown RBP11.48□□□□□ -0.57
SDF4-203ENST00000403997 HSH2DQ96JZ2 352 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 SEPHS2Q99611 448 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 MYOZ1Q9NP98 299 aaPredicted RBP11.48□□□□□ -0.57
SDF4-203ENST00000403997 MAN2C1Q9NTJ4 1040 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 ADA2Q9NZK5 511 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 HIF3AQ9Y2N7 669 aa11.48□□□□□ -0.57
SDF4-203ENST00000403997 RTTNQ86VV8 2226 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 GMNCA6NCL1 334 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 A8MV72 311 aaPredicted RBP11.47□□□□□ -0.57
SDF4-203ENST00000403997 EFCAB9A8MZ26 197 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 NDUFS8O00217 210 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 SNX3O60493 162 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 SLC2A10O95528 541 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 DRD4P21917 467 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 PRDX6P30041 224 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 CDAP32320 146 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 NR4A2P43354 598 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 EVX1P49640 407 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 RPL27P61353 136 aaKnown RBP11.47□□□□□ -0.57
SDF4-203ENST00000403997 RPS23P62266 143 aaKnown RBP11.47□□□□□ -0.57
SDF4-203ENST00000403997 VLDLRP98155 873 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 PLP2Q04941 152 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 PRKCDQ05655 676 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 CD47Q08722 323 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 TAF11Q15544 211 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 FXNQ16595 210 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 MSMPQ1L6U9 139 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 NRN1LQ496H8 165 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 IQCCQ4KMZ1 466 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 CYB5R2Q6BCY4 276 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 TBPL2Q6SJ96 375 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 RRM2BQ7LG56 351 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 IGFN1Q86VF2 1251 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 CYP4Z1Q86W10 505 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 ZNF584Q8IVC4 421 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 RNF113BQ8IZP6 322 aaKnown RBP11.47□□□□□ -0.57
SDF4-203ENST00000403997 RBM15BQ8NDT2 890 aaKnown RBP11.47□□□□□ -0.57
SDF4-203ENST00000403997 SLC30A7Q8NEW0 376 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 ACOT11Q8WXI4 607 aaPredicted RBP11.47□□□□□ -0.57
SDF4-203ENST00000403997 NSMAFQ92636 917 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 SYT3Q9BQG1 590 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 MRPL37Q9BZE1 423 aaKnown RBP11.47□□□□□ -0.57
SDF4-203ENST00000403997 KCNN2Q9H2S1 579 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 REV1Q9UBZ9 1251 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 EGFL7Q9UHF1 273 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 SLC7A8Q9UHI5 535 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 RPS6KA6Q9UK32 745 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 ZNF346Q9UL40 294 aaKnown RBP11.47□□□□□ -0.57
SDF4-203ENST00000403997 FZR1Q9UM11 496 aa11.47□□□□□ -0.57
SDF4-203ENST00000403997 FAM32AQ9Y421 112 aaKnown RBP11.47□□□□□ -0.57
SDF4-203ENST00000403997 TRAV27A0A087WT01 109 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 A0A087WUU8 490 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 IQCMA0A1B0GVH7 501 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 SLC22A23A1A5C7 686 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 NPIPB13A6NJU9 1138 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 KIAA1324LA8MWY0 1029 aaPredicted RBP11.46□□□□□ -0.57
SDF4-203ENST00000403997 VWC2LB2RUY7 222 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 NPIPB4C9JG80 1138 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 SYNGR3O43761 229 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 MGRN1O60291 552 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 GMNNO75496 209 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 STAMBPO95630 424 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 PTHP01270 115 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 CCL2P13500 99 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 DAOP14920 347 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 ZNF133P52736 654 aaPredicted RBP11.46□□□□□ -0.57
SDF4-203ENST00000403997 HSF2Q03933 536 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 SGCAQ16586 387 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 C10orf128Q5T292 105 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 GLYATQ6IB77 296 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 ZNF540Q8NDQ6 660 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 OR1J2Q8NGS2 313 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 RBP7Q96R05 134 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 ALG12Q9BV10 488 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 LRMDAQ9H2I8 198 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 TPK1Q9H3S4 243 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 C1orf198Q9H425 327 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 NMNAT1Q9HAN9 279 aaPredicted RBP11.46□□□□□ -0.57
SDF4-203ENST00000403997 SIAEQ9HAT2 523 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 CDH20Q9HBT6 801 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 CCNB1IP1Q9NPC3 277 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 SPAG4Q9NPE6 437 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 ABCD2Q9UBJ2 740 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 DUSP13Q9UII6 198 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 ADAM21Q9UKJ8 722 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 ENPP4Q9Y6X5 453 aa11.46□□□□□ -0.57
SDF4-203ENST00000403997 CHD3Q12873 2000 aaKnown RBP11.45□□□□□ -0.58
SDF4-203ENST00000403997 IGKV1D-43A0A0B4J1Z2 117 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 A6NIZ1 184 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 M0R233 179 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 PRSS23O95084 383 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 IGFBP1P08833 259 aaPredicted RBP11.45□□□□□ -0.58
SDF4-203ENST00000403997 FAM157BP0CG42 384 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 IGHV4-31P0DP07 118 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 NR2C1P13056 603 aa11.45□□□□□ -0.58
SDF4-203ENST00000403997 TCN1P20061 433 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms