RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 RPS15P62841 145 aaKnown RBP14.39□□□□□ -0.11
CHRFAM7A-203ENST00000401522 ZNF74Q16587 644 aa14.39□□□□□ -0.11
CHRFAM7A-203ENST00000401522 PRSS45Q7RTY3 260 aa14.39□□□□□ -0.11
CHRFAM7A-203ENST00000401522 ATG4DQ86TL0 474 aaPredicted RBP14.39□□□□□ -0.11
CHRFAM7A-203ENST00000401522 TMEM151BQ8IW70 566 aa14.39□□□□□ -0.11
CHRFAM7A-203ENST00000401522 GIMAP1Q8WWP7 306 aa14.39□□□□□ -0.11
CHRFAM7A-203ENST00000401522 GFI1Q99684 422 aa14.39□□□□□ -0.11
CHRFAM7A-203ENST00000401522 TCFL5Q9UL49 500 aa14.39□□□□□ -0.11
CHRFAM7A-203ENST00000401522 LOC101059948A0A1B0GTJ6 334 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 GABARAPH6UMI1 98 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 PRAF2O60831 178 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 ZFPL1O95159 310 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 TPOP07202 933 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 UMODP07911 640 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 CALCBP10092 127 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 MAPK3P27361 379 aaPredicted RBP14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 DLSTP36957 453 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 CDKN2AP42771 156 aaKnown RBP14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 CCR9P51686 369 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 PER3P56645 1201 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 ST3GAL2Q16842 350 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 ELFN2Q5R3F8 820 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 HES5Q5TA89 166 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 ZBTB37Q5TC79 503 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 FNDC7Q5VTL7 733 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 LYPD8Q6UX82 237 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 IZUMO1Q8IYV9 350 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 EXD3Q8N9H8 876 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 LRRC75AQ8NAA5 344 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 ANGPTL6Q8NI99 470 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 TSLPQ969D9 159 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 SLC25A38Q96DW6 304 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 Q96M85 177 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 CRB3Q9BUF7 120 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 SLITRK2Q9H156 845 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 SLC25A18Q9H1K4 315 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 C20orf85Q9H1P6 137 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 AUNIPQ9H7T9 357 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 EXOSC3Q9NQT5 275 aaKnown RBP14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 UBQLN4Q9NRR5 601 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 ANKRD10Q9NXR5 420 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 PTRH2Q9Y3E5 179 aaKnown RBP14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 V9GY05 133 aa14.38□□□□□ -0.11
CHRFAM7A-203ENST00000401522 AHCTF1Q8WYP5 2266 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 ACOD1A6NK06 481 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 GPR171O14626 319 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 NOS1APO75052 506 aaPredicted RBP14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 ALOX12BO75342 701 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 PEX14O75381 377 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 TXNDC12O95881 172 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 IFNA16P05015 189 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 CXCL3P19876 107 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 AQP2P41181 271 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 NANOS3P60323 173 aaKnown RBP14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 MRPS10P82664 201 aaKnown RBP14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 TMEM205Q6UW68 189 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 FAM122BQ7Z309 247 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 FAM109AQ8N4B1 249 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 IL22RA1Q8N6P7 574 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 C10orf53Q8N6V4 93 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 OR8H1Q8NGG4 311 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 C15orf40Q8WUR7 153 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 RAB40AQ8WXH6 277 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 RGP1Q92546 391 aaPredicted RBP14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 RNF166Q96A37 237 aaPredicted RBP14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 KLHL9Q9P2J3 617 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 ELF5Q9UKW6 265 aaPredicted RBP14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 BLOC1S5-TXNDC5H3BN57 136 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 SSNA1O43805 119 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 TSC22D2O75157 780 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 KRT33AO76009 404 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 CLPSP04118 112 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 UBL4AP11441 157 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 SDHAP31040 664 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 FOLR3P41439 243 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 OR3A3P47888 321 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 COL28A1Q2UY09 1125 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 EMC4Q5J8M3 183 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 FAM69BQ5VUD6 431 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 ZNF433Q8N7K0 673 aaPredicted RBP14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 LSM14AQ8ND56 463 aaKnown RBP14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 C17orf50Q8WW18 174 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 METTL21AQ8WXB1 218 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 DACT3Q96B18 629 aaPredicted RBP14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 HRASLSQ9HDD0 168 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 NANSQ9NR45 359 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 SCP2D1Q9UJQ7 156 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 ETV7Q9Y603 341 aa14.37□□□□□ -0.11
CHRFAM7A-203ENST00000401522 PRR32B1ATL7 298 aa14.36□□□□□ -0.11
CHRFAM7A-203ENST00000401522 SERPINI2O75830 405 aa14.36□□□□□ -0.11
CHRFAM7A-203ENST00000401522 TPPPO94811 219 aa14.36□□□□□ -0.11
CHRFAM7A-203ENST00000401522 TGM6O95932 706 aa14.36□□□□□ -0.11
CHRFAM7A-203ENST00000401522 RAF1P04049 648 aa14.36□□□□□ -0.11
CHRFAM7A-203ENST00000401522 HPGDP15428 266 aa14.36□□□□□ -0.11
CHRFAM7A-203ENST00000401522 GRPRP30550 384 aa14.36□□□□□ -0.11
CHRFAM7A-203ENST00000401522 MNDAP41218 407 aa14.36□□□□□ -0.11
CHRFAM7A-203ENST00000401522 SKP2Q13309 424 aa14.36□□□□□ -0.11
CHRFAM7A-203ENST00000401522 IKZF1Q13422 519 aa14.36□□□□□ -0.11
CHRFAM7A-203ENST00000401522 ALKBH1Q13686 389 aaKnown RBP14.36□□□□□ -0.11
CHRFAM7A-203ENST00000401522 SSPNQ14714 243 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms