RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ACHEP22303 614 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF93P35789 620 aaPredicted RBP13□□□□□ -0.33
PCDHGA11-201ENST00000398587 HMGA2P52926 109 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 AGERQ15109 404 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 TMEM92Q6UXU6 159 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF813Q6ZN06 617 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 GPR155Q7Z3F1 870 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZFAND1Q8TCF1 268 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 SELENOIQ9C0D9 397 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 IL20Q9NYY1 176 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 RGPD4Q7Z3J3 1758 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 SLC33A1O00400 549 aaPredicted RBP13□□□□□ -0.33
PCDHGA11-201ENST00000398587 FUCA1P04066 466 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZGLP1P0C6A0 271 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 EMDP50402 254 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 GRB2P62993 217 aaKnown RBP13□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF616Q08AN1 781 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 KCNJ8Q15842 424 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF684Q5T5D7 378 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 C12orf73Q69YU5 71 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 IDO2Q6ZQW0 420 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 GPR32P1Q8NGA4 272 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 ARL5BQ96KC2 179 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 EMC6Q9BV81 110 aa13□□□□□ -0.33
PCDHGA11-201ENST00000398587 MBD1Q9UIS9 605 aaPredicted RBP13□□□□□ -0.33
PCDHGA11-201ENST00000398587 CCR9P51686 369 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 EXOSC6Q5RKV6 272 aaKnown RBP12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 VN1R4Q7Z5H5 301 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF764Q96H86 408 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 MICU1Q9BPX6 476 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 OR11A1Q9GZK7 315 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 OR51B6Q9H340 312 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 LSM5Q9Y4Y9 91 aaKnown RBP12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 TMEM221A6NGB7 291 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 KLRC4-KLRK1H3BQV0 150 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 OR7C1O76099 320 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 SPDEFO95238 335 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 MZT1Q08AG7 82 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 SELENBP1Q13228 472 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 OXA1LQ15070 435 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF425Q6IV72 752 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 C6orf15Q6UXA7 325 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 ADGRE4PQ86SQ3 457 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 MAML2Q8IZL2 1156 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 DEFB123Q8N688 67 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 TMEM178AQ8NBL3 297 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 OR4K15Q8NH41 348 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 C8orf44Q96CB5 159 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 TXNDC15Q96J42 360 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 SGCZQ96LD1 299 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 NELFAQ9H3P2 528 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 H7C2Y5 167 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 PRKNO60260 465 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 OR8U9P0C7N5 309 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 CX3CR1P49238 355 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 PPA2Q9H2U2 334 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 RAB22AQ9UL26 194 aa12.99□□□□□ -0.33
PCDHGA11-201ENST00000398587 POU3F3P20264 500 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 CAV2P51636 162 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 MAP2K6P52564 334 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 AQP6Q13520 282 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 STEAP1BQ6NZ63 245 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 HAGHLQ6PII5 290 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 SFTPA1Q8IWL2 248 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 TTC9Q92623 222 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 MIB2Q96AX9 1013 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 METTL17Q9H7H0 456 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF286AQ9HBT8 521 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 RAB9BQ9NP90 201 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 ANKRD10Q9NXR5 420 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 B3GALT5Q9Y2C3 310 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 NINQ8N4C6 2090 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 DOK2O60496 412 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 CPT2P23786 658 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 RGS19P49795 217 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 PCBP3P57721 371 aaKnown RBP12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 GK2Q14410 553 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 Q6ZTK2 550 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 PLPP7Q8NBV4 271 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 SLAMF7Q9NQ25 335 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 WNT16Q9UBV4 365 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 ABHD16AO95870 558 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 UBBP0CG47 229 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 CALCBP10092 127 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 BLVRBP30043 206 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 FABP5Q01469 135 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 CDK5R1Q15078 307 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 ELP2Q6IA86 826 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 SMIM19Q96E16 107 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 ZNF845Q96IR2 970 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 DNAJB11Q9UBS4 358 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 CHST2Q9Y4C5 530 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 PRAMEF27A3QJZ7 478 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 OR2W5A6NFC9 320 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 PRSS23O95084 383 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 NAGAP17050 411 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 HCCSP53701 268 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 CLDN6P56747 220 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 OR5D18Q8NGL1 313 aa12.98□□□□□ -0.33
PCDHGA11-201ENST00000398587 PLA2G12AQ9BZM1 189 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms