RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 LOC105371242A0A075B767 164 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 A0A0B4J2E0 115 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 IGHV1-69-2A0A0G2JMI3 117 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 A0A1B0GX12 115 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 TPST1O60507 370 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 CDC14BO60729 498 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 SERPINB7O75635 380 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 OR6A2O95222 327 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 FARS2O95363 451 aaKnown RBP7.46□□□□□ -1.22
CAPN3-208ENST00000397204 SNAP29O95721 258 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 CLPTM1O96005 669 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 MT-ND5P03915 603 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 LCKP06239 509 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 ADORA3P0DMS8 318 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 PPIBP23284 216 aaKnown RBP7.46□□□□□ -1.22
CAPN3-208ENST00000397204 UCP2P55851 309 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 NCALDP61601 193 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 CDK6Q00534 326 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 MVKQ03426 396 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 ZP4Q12836 540 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 FOXL1Q12952 345 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 FAM209AQ5JX71 171 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 PRR31Q5SQ13 230 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 TMEM53Q6P2H8 277 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 LRFN4Q6PJG9 635 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 WDR88Q6ZMY6 472 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 CROCCP2Q86T23 111 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 WDFY1Q8IWB7 410 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 MIER2Q8N344 545 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 C10orf53Q8N6V4 93 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 SLC30A7Q8NEW0 376 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 OR1J2Q8NGS2 313 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 OR5J2Q8NH18 312 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 FGFBP3Q8TAT2 258 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 SLC25A44Q96H78 314 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-208ENST00000397204 MOGAT1Q96PD6 335 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 ZNF607Q96SK3 696 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 ZNF747Q9BV97 191 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 BCL2L14Q9BZR8 327 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 LRMDAQ9H2I8 198 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 ZNF696Q9H7X3 374 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 DECR2Q9NUI1 292 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 TESQ9UGI8 421 aaKnown RBP7.46□□□□□ -1.22
CAPN3-208ENST00000397204 GMEB1Q9Y692 573 aa7.46□□□□□ -1.22
CAPN3-208ENST00000397204 NOTCH1P46531 2555 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 IQCMA0A1B0GVH7 501 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 DHHO43323 396 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 TPST2O60704 377 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 FMO6PO60774 539 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 IGHV3-13P01766 116 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 IGHV2-5P01817 119 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 PATE4P0C8F1 98 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 KITP10721 976 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 HOXB9P17482 250 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-208ENST00000397204 DRD4P21917 467 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 SLC6A2P23975 617 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 CDH12P55289 794 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 BIDP55957 195 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 RGS8P57771 180 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-208ENST00000397204 PLP2Q04941 152 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 RBBP4Q09028 425 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 TBC1D28Q2M2D7 210 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 HFEQ30201 348 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 SLC36A2Q495M3 483 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 NRN1LQ496H8 165 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 AWAT1Q58HT5 328 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 LRIF1Q5T3J3 769 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 DCAF12L2Q5VW00 463 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 ZNF613Q6PF04 617 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 SLC35D2Q76EJ3 337 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 COMTD1Q86VU5 262 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 RANBP3LQ86VV4 465 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-208ENST00000397204 BPIFB2Q8N4F0 458 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 ZDHHC22Q8N966 263 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 NFKBIDQ8NI38 313 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 ZNF566Q969W8 418 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 WDR89Q96FK6 387 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-208ENST00000397204 TIMD4Q96H15 378 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 OR52B2Q96RD2 323 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 CENPHQ9H3R5 247 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 TMEM38AQ9H6F2 299 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 RNF121Q9H920 327 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 CDH20Q9HBT6 801 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 TCF7L2Q9NQB0 619 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 DDX28Q9NUL7 540 aaKnown RBP7.45□□□□□ -1.22
CAPN3-208ENST00000397204 TMEM38BQ9NVV0 291 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 SLC13A4Q9UKG4 626 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 WIPI2Q9Y4P8 454 aa7.45□□□□□ -1.22
CAPN3-208ENST00000397204 VWFP04275 2813 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 PPIAL4EA0A075B759 164 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 PPIAL4CA0A0B4J2A2 164 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 CLDN25C9JDP6 229 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 LRRN3E7EW58 273 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 C11orf98E9PRG8 122 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 PPIAL4DF5H284 164 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 TPD52L2O43399 206 aaKnown RBP7.44□□□□□ -1.22
CAPN3-208ENST00000397204 KCNAB3O43448 404 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 SERPINI2O75830 405 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 FSHBP01225 129 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 QDPRP09417 244 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms