RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ST8SIA2Q92186 375 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 TMEM106AQ96A25 262 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 WDR92Q96MX6 357 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 SLC6A15Q9H2J7 730 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 DUX4Q9UBX2 424 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 A0A1B0GTI1 187 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 SERINC4A6NH21 518 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 C4orf47A7E2U8 309 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 WNT11O96014 354 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 GTF2F2P13984 249 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 UBE2MP61081 183 aaKnown RBP12.06□□□□□ -0.48
TRIM40-207ENST00000396581 SORDQ00796 357 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 RASGEF1BQ0VAM2 473 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 ZNF345Q14585 488 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 ZNF169Q14929 603 aaPredicted RBP12.06□□□□□ -0.48
TRIM40-207ENST00000396581 ZNF74Q16587 644 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 EMC4Q5J8M3 183 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 STEAP1BQ6NZ63 245 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 RCBTB1Q8NDN9 531 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 OR51D1Q8NGF3 324 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 GUCD1Q96NT3 240 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 TSSK2Q96PF2 358 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 G6PC3Q9BUM1 346 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 CHST6Q9GZX3 395 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 COMMD4Q9H0A8 199 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 WNT16Q9UBV4 365 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 ZNF346Q9UL40 294 aaKnown RBP12.06□□□□□ -0.48
TRIM40-207ENST00000396581 CA14Q9ULX7 337 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 MRPS17Q9Y2R5 130 aaKnown RBP12.06□□□□□ -0.48
TRIM40-207ENST00000396581 KLF2Q9Y5W3 355 aaPredicted RBP12.06□□□□□ -0.48
TRIM40-207ENST00000396581 GON4LQ3T8J9 2241 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 GOLGA4Q13439 2230 aaKnown RBP12.06□□□□□ -0.48
TRIM40-207ENST00000396581 H0YC42 278 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 DCTN6O00399 190 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 SRPX2O60687 465 aaPredicted RBP12.06□□□□□ -0.48
TRIM40-207ENST00000396581 CSTAP01040 98 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 CD3DP04234 171 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 ASAH2BP0C7U1 165 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 CD37P11049 281 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 RAB3AP20336 220 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 PRSS3P35030 304 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 AQP2P41181 271 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 LSSP48449 732 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 STARD6P59095 220 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 GUCA2AQ02747 115 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 ZNF440Q8IYI8 595 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 PRSS35Q8N3Z0 413 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 ARHGEF39Q8N4T4 335 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 CLRN3Q8NCR9 226 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 OR5T2Q8NGG2 359 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 OR10AC1Q8NH08 325 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 CCDC107Q8WV48 283 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 C4orf45Q96LM5 186 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 DCBLD2Q96PD2 775 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 SLC25A21Q9BQT8 299 aaPredicted RBP12.06□□□□□ -0.48
TRIM40-207ENST00000396581 WDR76Q9H967 626 aa12.06□□□□□ -0.48
TRIM40-207ENST00000396581 LOC100289279A0A1B0GTE1 492 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 A0A1B0GTH9 108 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 PRAMEF26H0Y7S4 382 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 SLC17A2O00624 439 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 OR10H2O60403 315 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 CDC40O60508 579 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRIM40-207ENST00000396581 SPDEFO95238 335 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 ITGA5P08648 1049 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 H2AFB1P0C5Y9 115 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 GRK6P43250 576 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 POU3F4P49335 361 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 ACTBP60709 375 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 ACTG1P63261 375 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 ZMYND11Q15326 602 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 CLVS2Q5SYC1 327 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 NUP54Q7Z3B4 507 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 ATG4DQ86TL0 474 aaPredicted RBP12.05□□□□□ -0.48
TRIM40-207ENST00000396581 KCNRGQ8N5I3 272 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 TMEM229BQ8NBD8 167 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 OR51A4Q8NGJ6 313 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 CCL4L1Q8NHW4 92 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 STK35Q8TDR2 534 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 PHYHIPLQ96FC7 376 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 EDEM2Q9BV94 578 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 ZNF416Q9BWM5 594 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 EXO5Q9H790 373 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 TMEM138Q9NPI0 162 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 UPB1Q9UBR1 384 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 ZNF107Q9UII5 783 aaPredicted RBP12.05□□□□□ -0.48
TRIM40-207ENST00000396581 CYP8B1Q9UNU6 501 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 DTX4Q9Y2E6 619 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 TMEM14AQ9Y6G1 99 aa12.05□□□□□ -0.48
TRIM40-207ENST00000396581 TRAV18A0A075B6X5 111 aa12.04□□□□□ -0.48
TRIM40-207ENST00000396581 OR6C74A6NCV1 312 aa12.04□□□□□ -0.48
TRIM40-207ENST00000396581 PHYHO14832 338 aa12.04□□□□□ -0.48
TRIM40-207ENST00000396581 KDM4BO94953 1096 aa12.04□□□□□ -0.48
TRIM40-207ENST00000396581 OR4E1P0C645 316 aa12.04□□□□□ -0.48
TRIM40-207ENST00000396581 CT45A8P0DMV1 189 aa12.04□□□□□ -0.48
TRIM40-207ENST00000396581 CT45A9P0DMV2 189 aa12.04□□□□□ -0.48
TRIM40-207ENST00000396581 PNMTP11086 282 aa12.04□□□□□ -0.48
TRIM40-207ENST00000396581 SLC25A4P12235 298 aa12.04□□□□□ -0.48
TRIM40-207ENST00000396581 KIR3DL2P43630 455 aa12.04□□□□□ -0.48
TRIM40-207ENST00000396581 TAS2R19P59542 299 aa12.04□□□□□ -0.48
TRIM40-207ENST00000396581 CTXN1P60606 82 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms