RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 CORO2AQ92828 525 aa12.91□□□□□ -0.34
COL4A3-202ENST00000396578 NMNAT3Q96T66 252 aa12.91□□□□□ -0.34
COL4A3-202ENST00000396578 BARHL1Q9BZE3 327 aa12.91□□□□□ -0.34
COL4A3-202ENST00000396578 TRAV36DV7A0A075B6V5 113 aa12.91□□□□□ -0.34
COL4A3-202ENST00000396578 LRRC30A6NM36 301 aa12.91□□□□□ -0.34
COL4A3-202ENST00000396578 NECAP1Q8NC96 275 aa12.91□□□□□ -0.34
COL4A3-202ENST00000396578 OR6M1Q8NGM8 313 aa12.91□□□□□ -0.34
COL4A3-202ENST00000396578 GPR78Q96P69 363 aa12.91□□□□□ -0.34
COL4A3-202ENST00000396578 MN1Q10571 1320 aaPredicted RBP12.91□□□□□ -0.34
COL4A3-202ENST00000396578 SERTM2A0A1B0GWG4 89 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 SMAD6O43541 496 aaKnown RBP12.9□□□□□ -0.34
COL4A3-202ENST00000396578 ADH4P08319 380 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 RABEPKQ7Z6M1 372 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 NHLRC2Q8NBF2 726 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 TAS2R5Q9NYW4 299 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 ABHD16AO95870 558 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 THNSL2Q86YJ6 484 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 OR51A2Q8NGJ7 313 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 OR51S1Q8NGJ8 323 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 EMG1Q92979 244 aaKnown RBP12.9□□□□□ -0.34
COL4A3-202ENST00000396578 SLC25A32Q9H2D1 315 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 RIMS4Q9H426 269 aaPredicted RBP12.9□□□□□ -0.34
COL4A3-202ENST00000396578 NXT1Q9UKK6 140 aaKnown RBP12.9□□□□□ -0.34
COL4A3-202ENST00000396578 C4orf47A7E2U8 309 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 RAB27BO00194 218 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 CSF2RAP15509 400 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 PLAC9Q5JTB6 97 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 TNFRSF13CQ96RJ3 184 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 SIAEQ9HAT2 523 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 GOLT1BQ9Y3E0 138 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 DEGS1O15121 323 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 APEHP13798 732 aaKnown RBP12.9□□□□□ -0.34
COL4A3-202ENST00000396578 P2RX3P56373 397 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 ENDOGQ14249 297 aaKnown RBP12.9□□□□□ -0.34
COL4A3-202ENST00000396578 ZNF718Q3SXZ3 478 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 LRP10Q7Z4F1 713 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 LSMEM2Q8N112 164 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 SLC24A4Q8NFF2 622 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 OR4F5Q8NH21 305 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 OR4F4Q96R69 305 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 FBXO8Q9NRD0 319 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 PRSS21Q9Y6M0 314 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 KDM3BQ7LBC6 1761 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 DOK2O60496 412 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 WNT7BP56706 349 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 RANP62826 216 aaKnown RBP12.9□□□□□ -0.34
COL4A3-202ENST00000396578 HAGHQ16775 308 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 TOR2AQ5JU69 321 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 SYT6Q5T7P8 510 aaPredicted RBP12.9□□□□□ -0.34
COL4A3-202ENST00000396578 OR13C8Q8NGS7 320 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 FAM103A1Q9BTL3 118 aaKnown RBP12.9□□□□□ -0.34
COL4A3-202ENST00000396578 IL23AQ9NPF7 189 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 SERINC4A6NH21 518 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 EMP3P54852 163 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 RAB38P57729 211 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 FOXK2Q01167 660 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 TTC9BQ8N6N2 239 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 APH1AQ96BI3 265 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 SPACA1Q9HBV2 294 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 BOLA1Q9Y3E2 137 aa12.9□□□□□ -0.34
COL4A3-202ENST00000396578 ZFC3H1O60293 1989 aaKnown RBP12.9□□□□□ -0.34
COL4A3-202ENST00000396578 H7BYZ3 331 aa12.9□□□□□ -0.35
COL4A3-202ENST00000396578 TFAP2AP05549 437 aa12.9□□□□□ -0.35
COL4A3-202ENST00000396578 CSF3P09919 207 aa12.9□□□□□ -0.35
COL4A3-202ENST00000396578 PSMB5P28074 263 aa12.9□□□□□ -0.35
COL4A3-202ENST00000396578 SRP9P49458 86 aaKnown RBP12.9□□□□□ -0.35
COL4A3-202ENST00000396578 SNRPGP62308 76 aaKnown RBP12.9□□□□□ -0.35
COL4A3-202ENST00000396578 PCK2Q16822 640 aa12.9□□□□□ -0.35
COL4A3-202ENST00000396578 HNRNPA1L2Q32P51 320 aaKnown RBP12.9□□□□□ -0.35
COL4A3-202ENST00000396578 AAED1Q7RTV5 226 aa12.9□□□□□ -0.35
COL4A3-202ENST00000396578 CDH26Q8IXH8 852 aa12.9□□□□□ -0.35
COL4A3-202ENST00000396578 OR52N1Q8NH53 320 aa12.9□□□□□ -0.35
COL4A3-202ENST00000396578 NEURL3Q96EH8 262 aa12.9□□□□□ -0.35
COL4A3-202ENST00000396578 G3V3Q6 166 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 H0YIV9 168 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 ADIPOR2Q86V24 386 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 ST8SIA2Q92186 375 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 TSLPQ969D9 159 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 SLC35A4Q96G79 324 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 SULT1C4O75897 302 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 TOX4O94842 621 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 PDGFBP01127 241 aaPredicted RBP12.89□□□□□ -0.35
COL4A3-202ENST00000396578 FURINP09958 794 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 RAB1AP62820 205 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 NLRC3Q7RTR2 1065 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 ULBP3Q9BZM4 244 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 PARP12Q9H0J9 701 aaKnown RBP12.89□□□□□ -0.35
COL4A3-202ENST00000396578 ZMAT5Q9UDW3 170 aaKnown RBP12.89□□□□□ -0.35
COL4A3-202ENST00000396578 SSR4P51571 173 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 SLC46A1Q96NT5 459 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 NMES1Q9C002 83 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 RNF150Q9ULK6 438 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 SSSCA1O60232 199 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 UTS2O95399 124 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 ZNF85Q03923 595 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 PPP1R3BQ86XI6 285 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 CISD2Q8N5K1 135 aaKnown RBP12.89□□□□□ -0.35
COL4A3-202ENST00000396578 H1FXQ92522 213 aaKnown RBP12.89□□□□□ -0.35
COL4A3-202ENST00000396578 HAPLN2Q9GZV7 340 aa12.89□□□□□ -0.35
COL4A3-202ENST00000396578 PADI1Q9ULC6 663 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms