RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ZNF350Q9GZX5 532 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 UBE2ZQ9H832 354 aaPredicted RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 MKKSQ9NPJ1 570 aaPredicted RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 ZNF275Q9NSD4 429 aaPredicted RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 DCAF16Q9NXF7 216 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 CGGBP1Q9UFW8 167 aaPredicted RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 CHRNA9Q9UGM1 479 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 NDRG3Q9UGV2 375 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 LAMP5Q9UJQ1 280 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 COL4A2P08572 1712 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 DCTN6O00399 190 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 FGF17O60258 216 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 CTAG2O75638 210 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 AGR2O95994 175 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 CALCBP10092 127 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 PEBP1P30086 187 aaKnown RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 CAPZA2P47755 286 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 MRPS10P82664 201 aaKnown RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 EIF2B1Q14232 305 aaKnown RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 LY6G6FQ5SQ64 297 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 JMJD6Q6NYC1 403 aaPredicted RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 RBMS3Q6XE24 437 aaKnown RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 BIVMQ86UB2 503 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 EID2Q8N6I1 236 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 ZSCAN1Q8NBB4 408 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 TMEM52Q8NDY8 209 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 ZBTB8AQ96BR9 441 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 MRPL48Q96GC5 212 aaKnown RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 C10orf90Q96M02 699 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 GPN3Q9UHW5 284 aaPredicted RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 SLC22A13Q9Y226 551 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 MRPS2Q9Y399 296 aaKnown RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 A0A0D9SG52 128 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 MPTX1A8MV57 137 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 HIDE1A8MVS5 230 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 SLC31A1O15431 190 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 ZNF749O43361 778 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 OR2T1O43869 369 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 OR10H2O60403 315 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 RNGTTO60942 597 aaKnown RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 APOC1P02654 83 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 TACSTD2P09758 323 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 SLC35G6P0C7Q6 338 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 PVRP15151 417 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 EPCAMP16422 314 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 CSF2RBP32927 897 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 PRKXP51817 358 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 PLAURQ03405 335 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 FAM53BQ14153 422 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 NR0B2Q15466 257 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 PAN3Q58A45 887 aaKnown RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 VN1R4Q7Z5H5 301 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 BPIFB2Q8N4F0 458 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 CCDC107Q8WV48 283 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 PMM1Q92871 262 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 ZNF764Q96H86 408 aaPredicted RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 WDR76Q9H967 626 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 CLEC1BQ9P126 229 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 ZNF629Q9UEG4 869 aaPredicted RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 MRM2Q9UI43 246 aaKnown RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 C2orf16Q68DN1 1984 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 NUP210Q8TEM1 1887 aaPredicted RBP8.93□□□□□ -0.98
TRIM39-203ENST00000396547 TRBV23-1A0A0A0MS06 115 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 A0A0B4J2E0 115 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 A0A1B0GX12 115 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 CPED1A4D0V7 1026 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 P2RX6O15547 441 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 B3GALT2O43825 422 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 THBS1P07996 1170 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 ITGA5P08648 1049 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 ADCYAP1P18509 176 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 ARFIP1P53367 373 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 CTXN1P60606 82 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 DPTQ07507 201 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 DHRS2Q13268 280 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 HNRNPA1L2Q32P51 320 aaKnown RBP8.93□□□□□ -0.98
TRIM39-203ENST00000396547 CDNFQ49AH0 187 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 FAM209BQ5JX69 171 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 MOB3CQ70IA8 216 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 FOXRED2Q8IWF2 684 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 EIF4E3Q8N5X7 224 aaKnown RBP8.93□□□□□ -0.98
TRIM39-203ENST00000396547 CHST4Q8NCG5 386 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 CMKLR1Q99788 373 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 COMMD4Q9H0A8 199 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 MBD2Q9UBB5 411 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 MKL2Q9ULH7 1088 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 ASCC3Q8N3C0 2202 aaKnown RBP8.93□□□□□ -0.98
TRIM39-203ENST00000396547 OTOL1A6NHN0 477 aaPredicted RBP8.93□□□□□ -0.98
TRIM39-203ENST00000396547 ACTL6AO96019 429 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 AGTR1P30556 359 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 CXADRP78310 365 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 SMAD2Q15796 467 aaKnown RBP8.93□□□□□ -0.98
TRIM39-203ENST00000396547 C11orf87Q6NUJ2 197 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 TMEM200AQ86VY9 491 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 JAGN1Q8N5M9 183 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 SMRP1Q8NCR6 262 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 OR52R1Q8NGF1 315 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 RXFP4Q8TDU9 374 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 FAM3DQ96BQ1 224 aa8.93□□□□□ -0.98
TRIM39-203ENST00000396547 SPOCK3Q9BQ16 436 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms