RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 HSPB2Q16082 182 aa14.2□□□□□ -0.14
HOXA3-202ENST00000396352 FBXO46Q6PJ61 603 aaPredicted RBP14.2□□□□□ -0.14
HOXA3-202ENST00000396352 NUP54Q7Z3B4 507 aa14.2□□□□□ -0.14
HOXA3-202ENST00000396352 SCARB1Q8WTV0 552 aa14.2□□□□□ -0.14
HOXA3-202ENST00000396352 CPAMD8Q8IZJ3 1885 aa14.2□□□□□ -0.14
HOXA3-202ENST00000396352 TRAV18A0A075B6X5 111 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 F5H5P2 479 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 CDK2AP1O14519 115 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 LPLP06858 475 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 AKAIN1P0CW23 69 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 GTF2F2P13984 249 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 PPP3CBP16298 524 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 SLC37A1P57057 533 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 FAM166AQ6J272 317 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 PARGQ86W56 976 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 CLEC1AQ8NC01 280 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 COQ8AQ8NI60 647 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 MMABQ96EY8 250 aaPredicted RBP14.19□□□□□ -0.14
HOXA3-202ENST00000396352 DMRTA2Q96SC8 542 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 ADAM19Q9H013 955 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 NXF5Q9H1B4 397 aaKnown RBP14.19□□□□□ -0.14
HOXA3-202ENST00000396352 FXYD6-FXYD2A0A087WZ82 144 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 C17orf105B2RV13 164 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 BET1O15155 118 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 SEMA4FO95754 770 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 CD3DP04234 171 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 FBXO45P0C2W1 286 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 PBX2P40425 430 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 FZD2Q14332 565 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 TUSC1Q2TAM9 212 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 C2orf76Q3KRA6 126 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 NAXDQ8IW45 347 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 C7orf61Q8IZ16 206 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 PTPMT1Q8WUK0 201 aaPredicted RBP14.19□□□□□ -0.14
HOXA3-202ENST00000396352 TSEN15Q8WW01 171 aaKnown RBP14.19□□□□□ -0.14
HOXA3-202ENST00000396352 FAM3DQ96BQ1 224 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 NKX3-1Q99801 234 aaPredicted RBP14.19□□□□□ -0.14
HOXA3-202ENST00000396352 CHST6Q9GZX3 395 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 ARL6Q9H0F7 186 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 FXYD6Q9H0Q3 95 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 APMAPQ9HDC9 416 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 SPTY2D1-AS1A0A0U1RR47 76 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 TCRBV21S2A2A0A5A6 115 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 A8MXK9 166 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 PHYHO14832 338 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 PROS1P07225 676 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 GABRG2P18507 467 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 CCKBRP32239 447 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 OIT3Q8WWZ8 545 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 DNAJA3Q96EY1 480 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 OR8B4Q96RC9 309 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 MAP3K3Q99759 626 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 ALPK2Q86TB3 2170 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 THADAQ6YHU6 1953 aa14.19□□□□□ -0.14
HOXA3-202ENST00000396352 SLC17A2O00624 439 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 WISP1O95388 367 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 BGLAPP02818 100 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 FCER2P06734 321 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 GALNSP34059 522 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 C9orf50Q5SZB4 431 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 COL13A1Q5TAT6 717 aaPredicted RBP14.18□□□□□ -0.14
HOXA3-202ENST00000396352 TMEM81Q6P7N7 255 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 OVCH2Q7RTZ1 564 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 ZNF563Q8TA94 476 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 DVL3Q92997 716 aaPredicted RBP14.18□□□□□ -0.14
HOXA3-202ENST00000396352 ELOVL3Q9HB03 270 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 LOC100289279A0A1B0GTE1 492 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 C17orf51A8MQB3 221 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 B4DGG1 531 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 PRAMEF26H0Y7S4 382 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 WNT11O96014 354 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 PNPP00491 289 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 GABRA4P48169 554 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 CCINQ13939 588 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 MPPED2Q15777 294 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 RAB11BQ15907 218 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 MEP1BQ16820 701 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 C1QL3Q5VWW1 255 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 TSSK4Q6SA08 328 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 SLC35D2Q76EJ3 337 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 ZNF285Q96NJ3 590 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 FOXN4Q96NZ1 517 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 SLC22A13Q9Y226 551 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 CACNA1CQ13936 2221 aa14.18□□□□□ -0.14
HOXA3-202ENST00000396352 TRIM77I1YAP6 450 aa14.17□□□□□ -0.14
HOXA3-202ENST00000396352 GMFGO60234 142 aa14.17□□□□□ -0.14
HOXA3-202ENST00000396352 CDC40O60508 579 aaKnown RBP eCLIP14.17□□□□□ -0.14
HOXA3-202ENST00000396352 PRSS3P35030 304 aa14.17□□□□□ -0.14
HOXA3-202ENST00000396352 NUP62P37198 522 aaPredicted RBP14.17□□□□□ -0.14
HOXA3-202ENST00000396352 ZNF117Q03924 483 aa14.17□□□□□ -0.14
HOXA3-202ENST00000396352 SLC17A1Q14916 467 aa14.17□□□□□ -0.14
HOXA3-202ENST00000396352 TEX30Q5JUR7 227 aa14.17□□□□□ -0.14
HOXA3-202ENST00000396352 GSG1LQ6UXU4 331 aa14.17□□□□□ -0.14
HOXA3-202ENST00000396352 GPX8Q8TED1 209 aa14.17□□□□□ -0.14
HOXA3-202ENST00000396352 PPP1R14AQ96A00 147 aa14.17□□□□□ -0.14
HOXA3-202ENST00000396352 SLC25A28Q96A46 364 aa14.17□□□□□ -0.14
HOXA3-202ENST00000396352 SHARPINQ9H0F6 387 aa14.17□□□□□ -0.14
HOXA3-202ENST00000396352 C1orf198Q9H425 327 aa14.17□□□□□ -0.14
HOXA3-202ENST00000396352 SLC17A5Q9NRA2 495 aa14.17□□□□□ -0.14
HOXA3-202ENST00000396352 RAD1O60671 282 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms