RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MCHR2Q969V1 340 aa14.94□□□□□ -0.02
SNRPA1-202ENST00000394082 SH3GL3Q99963 347 aa14.94□□□□□ -0.02
SNRPA1-202ENST00000394082 CDH20Q9HBT6 801 aa14.94□□□□□ -0.02
SNRPA1-202ENST00000394082 TREM2Q9NZC2 230 aa14.94□□□□□ -0.02
SNRPA1-202ENST00000394082 TAAR3PQ9P1P4 343 aa14.94□□□□□ -0.02
SNRPA1-202ENST00000394082 STX18Q9P2W9 335 aaKnown RBP14.94□□□□□ -0.02
SNRPA1-202ENST00000394082 SLC7A7Q9UM01 511 aa14.94□□□□□ -0.02
SNRPA1-202ENST00000394082 IQCMA0A1B0GVH7 501 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 NPIPB13A6NJU9 1138 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 NPIPB4C9JG80 1138 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 IGHV3-13P01766 116 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 MT-ND5P03915 603 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 CD247P20963 164 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 PCGF2P35227 344 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 MAGEB1P43366 347 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 ZNF84P51523 738 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 PLP2Q04941 152 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 ACSM5Q6NUN0 579 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 SHQ1Q6PI26 577 aaKnown RBP14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 CCDC80Q76M96 950 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 PAQR4Q8N4S7 273 aaPredicted RBP14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 LRRC17Q8N6Y2 441 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 OR4D11Q8NGI4 311 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 LIPHQ8WWY8 451 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 RAB39BQ96DA2 213 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 POLR2J2Q9GZM3 115 aaKnown RBP14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 POLR2J3Q9H1A7 115 aaKnown RBP14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 RNF121Q9H920 327 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 SMURF2Q9HAU4 748 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 G6PC2Q9NQR9 355 aa14.93□□□□□ -0.02
SNRPA1-202ENST00000394082 ANGPT2O15123 496 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 CLPTM1O96005 669 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 MT-ND1P03886 318 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 OPN1SWP03999 348 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 MMP7P09237 267 aaPredicted RBP14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 TSPAN19P0C672 248 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 FAM157BP0CG42 384 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 CFPP27918 469 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 RBM34P42696 430 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 DAP3P51398 398 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 CLRN1P58418 232 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 MTPNP58546 118 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 MELKQ14680 651 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 C10orf128Q5T292 105 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 UNQ6126/PRO20091Q6UXV3 157 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 NANOGNBQ7Z5D8 188 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 TSPYL5Q86VY4 417 aaPredicted RBP14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 RBM45Q8IUH3 476 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 RBM15BQ8NDT2 890 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 FAM216AQ8WUB2 273 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 TAMM41Q96BW9 452 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 PRSS27Q9BQR3 290 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 NARFLQ9H6Q4 476 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 SIAEQ9HAT2 523 aa14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 MEPEQ9NQ76 525 aaPredicted RBP14.92□□□□□ -0.02
SNRPA1-202ENST00000394082 IGHV1-69-2A0A0G2JMI3 117 aa14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 A0A1W2PRG6 482 aa14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 J3QLI3 93 aa14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 GATA3P23771 443 aa14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 ARFIP2P53365 341 aa14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 UGT2B15P54855 530 aa14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 HILS1P60008 231 aa14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 CCL8P80075 99 aa14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 MRPS34P82930 218 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 RETREG3Q86VR2 466 aa14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 NOXO1Q8NFA2 376 aa14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 ASB10Q8WXI3 467 aa14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 ZMYND19Q96E35 227 aaPredicted RBP14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 JMJD8Q96S16 334 aa14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 ZNF665Q9H7R5 613 aa14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 PCDHB10Q9UN67 800 aa14.91□□□□□ -0.02
SNRPA1-202ENST00000394082 A0A0G2JMP0 313 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 A0A0X1KG70 313 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 HTR3EA5X5Y0 456 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 GMNCA6NCL1 334 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 BLOC1S5-TXNDC5H3BN57 136 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 ICMTO60725 284 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 DEAF1O75398 565 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 LCKP06239 509 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 UMPSP11172 480 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 NR2C1P13056 603 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 CCL2P13500 99 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 ACADSP16219 412 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 APLNRP35414 380 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 GZMMP51124 257 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 RUNX1T1Q06455 604 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 RPL18Q07020 188 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 SELPLGQ14242 412 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 VMACQ2NL98 169 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 FAHD2BQ6P2I3 314 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 C1orf229Q6ZS94 237 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 OR4M2Q8NGB6 313 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 VANGL1Q8TAA9 524 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 SLC26A7Q8TE54 656 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 FAHD2AQ96GK7 314 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 TSPAN32Q96QS1 320 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 ZNF347Q96SE7 839 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 KCNN2Q9H2S1 579 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 LPAR2Q9HBW0 351 aa14.9□□□□□ -0.02
SNRPA1-202ENST00000394082 CGGBP1Q9UFW8 167 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms