RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 NANOS3P60323 173 aaKnown RBP13.4□□□□□ -0.26
MKS1-202ENST00000393119 HNRNPA0Q13151 305 aaKnown RBP13.4□□□□□ -0.26
MKS1-202ENST00000393119 EIF3IQ13347 325 aaKnown RBP13.4□□□□□ -0.26
MKS1-202ENST00000393119 TIMM50Q3ZCQ8 353 aa13.4□□□□□ -0.26
MKS1-202ENST00000393119 DCAF10Q5QP82 559 aa13.4□□□□□ -0.26
MKS1-202ENST00000393119 EEF1A1P5Q5VTE0 462 aa13.4□□□□□ -0.26
MKS1-202ENST00000393119 CARD17Q5XLA6 110 aa13.4□□□□□ -0.26
MKS1-202ENST00000393119 TIGD3Q6B0B8 471 aa13.4□□□□□ -0.26
MKS1-202ENST00000393119 NRARPQ7Z6K4 114 aa13.4□□□□□ -0.26
MKS1-202ENST00000393119 NR2C2APQ86WQ0 139 aa13.4□□□□□ -0.26
MKS1-202ENST00000393119 PGLYRP3Q96LB9 341 aa13.4□□□□□ -0.26
MKS1-202ENST00000393119 PTGES2Q9H7Z7 377 aa13.4□□□□□ -0.26
MKS1-202ENST00000393119 SERINC1Q9NRX5 453 aa13.4□□□□□ -0.26
MKS1-202ENST00000393119 PLSCR3Q9NRY6 295 aa13.4□□□□□ -0.26
MKS1-202ENST00000393119 ST6GALNAC2Q9UJ37 374 aa13.4□□□□□ -0.26
MKS1-202ENST00000393119 COA3Q9Y2R0 106 aaPredicted RBP13.4□□□□□ -0.26
MKS1-202ENST00000393119 HMX3A6NHT5 357 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 ZNF208O43345 1280 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 RENP00797 406 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 OR2T7P0C7T2 308 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 PRKAR1AP10644 381 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 WT1P19544 449 aaPredicted RBP13.39□□□□□ -0.27
MKS1-202ENST00000393119 P2RY4P51582 365 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 SLC25A1P53007 311 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 LGALS3BPQ08380 585 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 ODF4Q2M2E3 257 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 H3F3CQ6NXT2 135 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 GLRX5Q86SX6 157 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 OR2T27Q8NH04 317 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 ADAMTS14Q8WXS8 1223 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 THAP4Q8WY91 577 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 NSMAFQ92636 917 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 GHSRQ92847 366 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 PPP1R14AQ96A00 147 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 ADAD1Q96M93 576 aaKnown RBP13.39□□□□□ -0.27
MKS1-202ENST00000393119 NEDD4LQ96PU5 975 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 UCN2Q96RP3 112 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 ARPC5LQ9BPX5 153 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 CHST11Q9NPF2 352 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 MRPL22Q9NWU5 206 aaKnown RBP13.39□□□□□ -0.27
MKS1-202ENST00000393119 BOLA1Q9Y3E2 137 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 MGAQ8IWI9 3026 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 DOK2O60496 412 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 BIDP55957 195 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 CLDN20P56880 219 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 HSF1Q00613 529 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 CAMK2DQ13557 499 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 C3orf33Q6P1S2 294 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 CD200R1LQ6Q8B3 271 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 THEM6Q8WUY1 208 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 ISYNA1Q9NPH2 558 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 TRIM36Q9NQ86 728 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 TMA7Q9Y2S6 64 aaKnown RBP13.39□□□□□ -0.27
MKS1-202ENST00000393119 NCKAP5O14513 1909 aa13.39□□□□□ -0.27
MKS1-202ENST00000393119 CRYZL1O95825 349 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 ICAM2P13598 275 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 DLX5P56178 289 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 ACSM1Q08AH1 577 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 MFAP5Q13361 173 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 GPR139Q6DWJ6 353 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 LIX1LQ8IVB5 337 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 ARMC10Q8N2F6 343 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 OR2T4Q8NH00 348 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 GRPEL2Q8TAA5 225 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 ASB10Q8WXI3 467 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 NTNG2Q96CW9 530 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 GPR87Q9BY21 358 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 LRFN1Q9P244 771 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 MRM2Q9UI43 246 aaKnown RBP13.38□□□□□ -0.27
MKS1-202ENST00000393119 DKKL1Q9UK85 242 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 URB1O60287 2271 aaKnown RBP13.38□□□□□ -0.27
MKS1-202ENST00000393119 IGLV1-36A0A0B4J1U3 117 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 A0A0G2JMP0 313 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 ANKRD61A6NGH8 418 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 LRRC3CA6NJW4 275 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 NKX2-8O15522 239 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 TRAPPC6AO75865 159 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 P04436 131 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 CELA3AP09093 270 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 MRPS15P82914 257 aaKnown RBP13.38□□□□□ -0.27
MKS1-202ENST00000393119 CDONQ4KMG0 1287 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 EMC4Q5J8M3 183 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 SLC35D3Q5M8T2 416 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 SPANXN2Q5MJ10 180 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 WIPI1Q5MNZ9 446 aaPredicted RBP13.38□□□□□ -0.27
MKS1-202ENST00000393119 LCN1P1Q5VSP4 162 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 NHLRC1Q6VVB1 395 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 POMGNT2Q8NAT1 580 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 KCTD7Q96MP8 289 aa13.38□□□□□ -0.27
MKS1-202ENST00000393119 PLEKHB1Q9UF11 243 aaPredicted RBP13.38□□□□□ -0.27
MKS1-202ENST00000393119 TRDV1A0A1B0GX56 115 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 C21orf140B9A014 251 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 NPIPA5E9PKD4 350 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 ZNF593O00488 134 aaPredicted RBP13.37□□□□□ -0.27
MKS1-202ENST00000393119 TNFSF11O14788 317 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 NEURL1O76050 574 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 WDPCPO95876 746 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 ENPP1P22413 925 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 CYB561P49447 251 aa13.37□□□□□ -0.27
MKS1-202ENST00000393119 OR10A3P58181 314 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms