RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 RTL9Q8NET4 1388 aa2.19□□□□□ -2.06
PTPRC-205ENST00000391970 TRPM3Q9HCF6 1732 aaPredicted RBP2.19□□□□□ -2.06
PTPRC-205ENST00000391970 SHPRHQ149N8 1683 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 WDR19Q8NEZ3 1342 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 RGS12O14924 1447 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 TROQ12816 1431 aaPredicted RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 SYCP2Q9BX26 1530 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 ADCY10Q96PN6 1610 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 ANKRD26Q9UPS8 1709 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 KMT2BQ9UMN6 2715 aaPredicted RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 IGHV3OR16-13A0A075B7E8 117 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 A0A0J9YXY3 114 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 TCRBV9S1A1TA0A576 114 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 GOLGA8JA6NMD2 632 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 GOLGA8SH3BPF8 625 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 GFYI3L273 518 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 UBXN8O00124 270 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 HIP1O00291 1037 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 LAD1O00515 517 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 UGT1A9O60656 530 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 PFDN1O60925 122 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 ZNF780AO75290 641 aaPredicted RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 MMP23AO75900 390 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 CIAO1O76071 339 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 LYPLA2O95372 231 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 FAM107AO95990 144 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 SNRPAP09012 282 aaKnown RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 POLR2MP0CAP2 368 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 ATF6P18850 670 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 PBLDP30039 288 aaPredicted RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 TAGLN2P37802 199 aaKnown RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 HSPA9P38646 679 aaKnown RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 DDOSTP39656 456 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 SLC1A1P43005 524 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 ATP5OP48047 213 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 GPX6P59796 221 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 RPL23AP62750 156 aaKnown RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 ELF3P78545 371 aaPredicted RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 CDK16Q00536 496 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 KDSRQ06136 332 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 ENPEPQ07075 957 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 DDX39BQ13838 428 aaKnown RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 CASP8Q14790 479 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 ZMYND11Q15326 602 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 TSC22D1Q15714 1073 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 DUSP7Q16829 419 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 PARP15Q460N3 678 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 BCL7AQ4VC05 210 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 TEX30Q5JUR7 227 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 PHYHD1Q5SRE7 291 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 C1orf146Q5VVC0 180 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 METTL21CQ5VZV1 264 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 SPOPLQ6IQ16 392 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 RWDD4Q6NW29 188 aaKnown RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 IL34Q6ZMJ4 242 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 KDM7AQ6ZMT4 941 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 PGAP1Q75T13 922 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 PRSS41Q7RTY9 318 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 COMTD1Q86VU5 262 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 TRIM69Q86WT6 500 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 ERI1Q8IV48 349 aaKnown RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 LRRC8AQ8IWT6 810 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 PRR22Q8IZ63 422 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 NKAPP1Q8N9T2 125 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 CCDC71LQ8N9Z2 235 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 FAM83FQ8NEG4 500 aaPredicted RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 OR2L5Q8NG80 312 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 OR4K14Q8NGD5 310 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 OR52H1Q8NGJ2 320 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 OR1L4Q8NGR5 311 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 RAB3IL1Q8TBN0 382 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 SLC22A8Q8TCC7 542 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 DNAJA4Q8WW22 397 aaPredicted RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 RASSF5Q8WWW0 418 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 UFD1Q92890 307 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 FGF11Q92914 225 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 NT5C3BQ969T7 300 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 PHYHIPLQ96FC7 376 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 PAGE5Q96GU1 130 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 ZNF641Q96N77 438 aaPredicted RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 BIRC8Q96P09 236 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 HIST1H4GQ99525 98 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 TSG101Q99816 390 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 TRIM62Q9BVG3 475 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 API5Q9BZZ5 524 aaKnown RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 SELENOIQ9C0D9 397 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 NDEL1Q9GZM8 345 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 FOLH1BQ9HBA9 442 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 LZTFL1Q9NQ48 299 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 C8orf4Q9NR00 106 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 DDX18Q9NVP1 670 aaKnown RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 GID8Q9NWU2 228 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 HYPKQ9NX55 129 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 TREM2Q9NZC2 230 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 BFARQ9NZS9 450 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 NUP50Q9UKX7 468 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 ZNF256Q9Y2P7 627 aaPredicted RBP2.18□□□□□ -2.06
PTPRC-205ENST00000391970 ACOT9Q9Y305 439 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 HEY1Q9Y5J3 304 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 V9GY05 133 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms