RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 CCDC88CQ9P219 2028 aa6.77□□□□□ -1.32
TRBV28-201ENST00000390400 NUP214P35658 2090 aaPredicted RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 TRAV1-2A0A0B4J238 106 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 A0A0D9SG52 128 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 LINC00854A0A1B0GVQ3 168 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 KDM4EB2RXH2 506 aaPredicted RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 C5orf58C9J3I9 102 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 LRRN3E7EW58 273 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 TMPRSS11DO60235 418 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 PLOD3O60568 738 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 PRAMEF2O60811 474 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 SCO1O75880 301 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 SERPINA3P01011 423 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 GBAP04062 536 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 RNH1P13489 461 aaKnown RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 COX7A2P14406 83 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 GABRA1P14867 456 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 POU1F1P28069 291 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 TLX1P31314 330 aaPredicted RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 PMELP40967 661 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 OR1D4P47884 311 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 DLX5P56178 289 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 RAB4BP61018 213 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 TSPAN5P62079 268 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 TRA2BP62995 288 aaKnown RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 RAE1P78406 368 aaKnown RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 DCDP81605 110 aaKnown RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 CDK5Q00535 292 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 EEF1A2Q05639 463 aaKnown RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 PPP1R8Q12972 351 aaKnown RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 RUNX2Q13950 521 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 SCARB2Q14108 478 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 HFEQ30201 348 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 NKAIN1Q4KMZ8 207 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 LBHQ53QV2 105 aaPredicted RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 ENTPD8Q5MY95 495 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 DCST1Q5T197 706 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 HES5Q5TA89 166 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 PRAMEF8Q5VWM4 474 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 PRAMEF7Q5VXH5 474 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 OLFML2AQ68BL7 652 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 SLC30A6Q6NXT4 461 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 LPCAT3Q6P1A2 487 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 ZNF621Q6ZSS3 439 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 ZNF551Q7Z340 670 aaPredicted RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 TSEN54Q7Z6J9 526 aaKnown RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 STX12Q86Y82 276 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 CA13Q8N1Q1 262 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 SLC43A2Q8N370 569 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 KLHL36Q8N4N3 616 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 KRTCAP2Q8N6L1 136 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 AMER3Q8N944 861 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 SYT14Q8NB59 555 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 SLC38A9Q8NBW4 561 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 OR11H4Q8NGC9 324 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 OR5T3Q8NGG3 340 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 CDC26Q8NHZ8 85 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 HAVCR2Q8TDQ0 301 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 ADAMTS18Q8TE60 1221 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 C16orf78Q8WTQ4 265 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 SMIM4Q8WVI0 70 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 FGF11Q92914 225 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 MR1Q95460 341 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 TPD52L3Q96J77 140 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 SLC46A1Q96NT5 459 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 TSSK3Q96PN8 268 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 MNTQ99583 582 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 NIPSNAP1Q9BPW8 284 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 DUSP26Q9BV47 211 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 NKX6-2Q9C056 277 aaPredicted RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 ZCCHC4Q9H5U6 513 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 RNF122Q9H9V4 155 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 NMNAT1Q9HAN9 279 aaPredicted RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 CACYBPQ9HB71 228 aaKnown RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 MYNNQ9NPC7 610 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 TMEM138Q9NPI0 162 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 KLHL1Q9NR64 748 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 BABAM2Q9NXR7 383 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 TAS2R5Q9NYW4 299 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 FOXJ2Q9P0K8 574 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 COMMD3Q9UBI1 195 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 TRPC4Q9UBN4 977 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 EXTL2Q9UBQ6 330 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 CTSFQ9UBX1 484 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 KLK13Q9UKR3 277 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 FBXW2Q9UKT8 454 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 EXOGQ9Y2C4 368 aaKnown RBP6.77□□□□□ -1.33
TRBV28-201ENST00000390400 DLGAP4Q9Y2H0 992 aa6.77□□□□□ -1.33
TRBV28-201ENST00000390400 OR2M5A3KFT3 312 aa6.76□□□□□ -1.33
TRBV28-201ENST00000390400 C9J4A7 227 aa6.76□□□□□ -1.33
TRBV28-201ENST00000390400 MCRIP1C9JLW8 97 aa6.76□□□□□ -1.33
TRBV28-201ENST00000390400 STMND1H3BQB6 276 aa6.76□□□□□ -1.33
TRBV28-201ENST00000390400 SSNA1O43805 119 aa6.76□□□□□ -1.33
TRBV28-201ENST00000390400 CREBL2O60519 120 aaPredicted RBP6.76□□□□□ -1.33
TRBV28-201ENST00000390400 HPGDSO60760 199 aa6.76□□□□□ -1.33
TRBV28-201ENST00000390400 AIFM1O95831 613 aa6.76□□□□□ -1.33
TRBV28-201ENST00000390400 ABHD16AO95870 558 aa6.76□□□□□ -1.33
TRBV28-201ENST00000390400 HPP00738 406 aa6.76□□□□□ -1.33
TRBV28-201ENST00000390400 MELTFP08582 738 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms