RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 HGDQ93099 445 aa0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 EFHD2Q96C19 240 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 MED8Q96G25 268 aa0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 C7orf34Q96L11 122 aa0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 ZNF488Q96MN9 340 aa0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 SECISBP2Q96T21 854 aaKnown RBP0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 PKMYT1Q99640 499 aa0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 ZNF649Q9BS31 505 aa0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 TUBGCP2Q9BSJ2 902 aa0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 C1orf198Q9H425 327 aa0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 NHEJ1Q9H9Q4 299 aaPredicted RBP0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 ADAP2Q9NPF8 381 aa0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 UVRAGQ9P2Y5 699 aa0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 ENOPH1Q9UHY7 261 aa0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 CBY1Q9Y3M2 126 aa0.53□□□□□ -2.32
RNU6-1040P-201ENST00000383974 COL22A1Q8NFW1 1626 aaPredicted RBP0.53□□□□□ -2.33
RNU6-1040P-201ENST00000383974 H0YJW9 148 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 ATP5LO75964 103 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 TM7SF2O76062 418 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 IGKV1-16P04430 117 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 IFI30P13284 250 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 TNNI3P19429 210 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 DNAJB1P25685 340 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 CEACAM6P40199 344 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 QARSP47897 775 aaKnown RBP0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 RFX3P48380 749 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 C1orf61Q13536 156 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 ARL9Q6T311 187 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 SPNS3Q6ZMD2 512 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 C16orf47Q6ZP98 133 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 SLC16A13Q7RTY0 426 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 HDDC2Q7Z4H3 204 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 WDFY1Q8IWB7 410 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 PRSS58Q8IYP2 241 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 IP6K3Q96PC2 410 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 RHOXF2Q9BQY4 288 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 OR52D1Q9H346 318 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 CHMP2BQ9UQN3 213 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 TSSC4Q9Y5U2 329 aaPredicted RBP0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 AHNAK2Q8IVF2 5795 aa0.52□□□□□ -2.33
RNU6-1040P-201ENST00000383974 A0A0B4J2A0 478 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 IGHV1OR15-9A0A0B4J2B8 117 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 BTN3A3O00478 584 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 NACADO15069 1562 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 SPAG9O60271 1321 aaKnown RBP0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 MGRN1O60291 552 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 UTS2O95399 124 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 H6PDO95479 791 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 TCP1P17987 556 aaKnown RBP0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 HMGB2P26583 209 aaKnown RBP0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 CASP14P31944 242 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 HRH1P35367 487 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 SYKP43405 635 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 ZNF138P52744 262 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 PEX26Q7Z412 305 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 OR10T2Q8NGX3 314 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 OR6N1Q8NGY5 312 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 PYROXD1Q8WU10 500 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 FAM3DQ96BQ1 224 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 WDR34Q96EX3 536 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 C18orf15Q96N68 181 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 RPAP1Q9BWH6 1393 aaPredicted RBP0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 PARP11Q9NR21 331 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 TMOD2Q9NZR1 351 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 PCSK1NQ9UHG2 260 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 SHPKQ9UHJ6 478 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 KCNIP3Q9Y2W7 256 aa0.51□□□□□ -2.33
RNU6-1040P-201ENST00000383974 FLG2Q5D862 2391 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 TRAV39A0A0B4J263 110 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 OR5B21A6NL26 309 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 RAB3DO95716 219 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 PTBP3O95758 552 aaKnown RBP0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 DRD5P21918 477 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 SLC2A5P22732 501 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 ME2P23368 584 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 MAS1LP35410 378 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 FUSP35637 526 aaKnown RBP eCLIP0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 TCP10Q12799 353 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 GANABQ14697 944 aaKnown RBP0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 TRIM40Q6P9F5 258 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 PLET1Q6UQ28 207 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 TEX43Q6ZNM6 134 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 RBM43Q6ZSC3 357 aaKnown RBP0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 USP50Q70EL3 339 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 ASCL5Q7RTU5 278 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 NT5DC3Q86UY8 548 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 ZSCAN30Q86W11 494 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 CDKL3Q8IVW4 592 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 SLC38A6Q8IZM9 456 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 PUSL1Q8N0Z8 303 aaKnown RBP0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 CEP112Q8N8E3 955 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 ZNF557Q8N988 423 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 FAM133AQ8N9E0 248 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 MRPL38Q96DV4 380 aaKnown RBP0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 C4orf36Q96KX1 117 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 SH3GL3Q99963 347 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 RPF2Q9H7B2 306 aaKnown RBP0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 FN3KRPQ9HA64 309 aa0.5□□□□□ -2.33
RNU6-1040P-201ENST00000383974 TRAV6A0A075B6T7 132 aa0.49□□□□□ -2.33
RNU6-1040P-201ENST00000383974 FAM170AA1A519 330 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms