RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 C1orf162Q8NEQ5 155 aaPredicted RBP13.58□□□□□ -0.24
PDGFB-202ENST00000381551 OR1K1Q8NGR3 316 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 NRG4Q8WWG1 115 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 BCL2L2Q92843 193 aaPredicted RBP13.58□□□□□ -0.24
PDGFB-202ENST00000381551 S100PBPQ96BU1 408 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 NUAK2Q9H093 628 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 OR10A4Q9H209 315 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 SYT4Q9H2B2 425 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 RIBC2Q9H4K1 309 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 CMC2Q9NRP2 79 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 KLHL21Q9UJP4 597 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 UGT2A1Q9Y4X1 527 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 ADGRG4Q8IZF6 3080 aa13.58□□□□□ -0.24
PDGFB-202ENST00000381551 A1L4Q6 167 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 E9PQ18 207 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 DLGAP1O14490 977 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 SURF4O15260 269 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 SLC16A7O60669 478 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 RAD51DO75771 328 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 SNAP29O95721 258 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 RENP00797 406 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 IFNGP01579 166 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 CTLA4P16410 223 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 IL32P24001 234 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 EFNB1P98172 346 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 ETFDHQ16134 617 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 ANKRD16Q6P6B7 361 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 OR6V1Q8N148 313 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 SDR9C7Q8NEX9 313 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 NSMAFQ92636 917 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 WFIKKN1Q96NZ8 548 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 TSSK2Q96PF2 358 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 USB1Q9BQ65 265 aaKnown RBP13.57□□□□□ -0.24
PDGFB-202ENST00000381551 TEX12Q9BXU0 123 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 GRIP2Q9C0E4 1043 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 ACTR6Q9GZN1 396 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 TOR3AQ9H497 397 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 SRA1Q9HD15 236 aaKnown RBP13.57□□□□□ -0.24
PDGFB-202ENST00000381551 TVP23BQ9NYZ1 205 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 B9D1Q9UPM9 204 aa13.57□□□□□ -0.24
PDGFB-202ENST00000381551 SPTAN1Q13813 2472 aaKnown RBP13.56□□□□□ -0.24
PDGFB-202ENST00000381551 OR5H1A6NKK0 313 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 RIIAD1A6NNX1 92 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 DCTN6O00399 190 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 PPP3CBP16298 524 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 PEX19P40855 299 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 ZNF84P51523 738 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 CRMP1Q14194 572 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 SNAPC1Q16533 368 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 C12orf73Q69YU5 71 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 SP5Q6BEB4 398 aaPredicted RBP13.56□□□□□ -0.24
PDGFB-202ENST00000381551 ZBTB46Q86UZ6 589 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 P2RY8Q86VZ1 359 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 DMRTC2Q8IXT2 367 aaPredicted RBP13.56□□□□□ -0.24
PDGFB-202ENST00000381551 WDR31Q8NA23 367 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 CYB561A3Q8NBI2 242 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 LINC01560Q8TB33 94 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 PTP4A1Q93096 173 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 RDH12Q96NR8 316 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 MBOAT4Q96T53 435 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 FOXB1Q99853 325 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 NMNAT2Q9BZQ4 307 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 NELFAQ9H3P2 528 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 RPRD1BQ9NQG5 326 aaKnown RBP13.56□□□□□ -0.24
PDGFB-202ENST00000381551 TMEM38BQ9NVV0 291 aa13.56□□□□□ -0.24
PDGFB-202ENST00000381551 UTP20O75691 2785 aaKnown RBP13.56□□□□□ -0.24
PDGFB-202ENST00000381551 USP9YO00507 2555 aaPredicted RBP13.56□□□□□ -0.24
PDGFB-202ENST00000381551 A0A096LPE4 126 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 A0A1W2PPZ6 126 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 TUBAL3A6NHL2 446 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 KHDRBS3O75525 346 aaKnown RBP13.55□□□□□ -0.24
PDGFB-202ENST00000381551 HOXB1P14653 301 aaPredicted RBP13.55□□□□□ -0.24
PDGFB-202ENST00000381551 ZNF3P17036 446 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 CRABP1P29762 137 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 SLC25A1P53007 311 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 MRPS34P82930 218 aaKnown RBP13.55□□□□□ -0.24
PDGFB-202ENST00000381551 DBPQ10586 325 aaPredicted RBP13.55□□□□□ -0.24
PDGFB-202ENST00000381551 TBRG1Q3YBR2 411 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 NRN1LQ496H8 165 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 HIKESHIQ53FT3 197 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 TIMM23BQ5SRD1 257 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 ZNF813Q6ZN06 617 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 FOXL2NBQ6ZUU3 175 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 C17orf78Q8N4C9 275 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 HSD17B8Q92506 261 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 HRASLS5Q96KN8 279 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 SLC38A2Q96QD8 506 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 SPOCK3Q9BQ16 436 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 FN3KQ9H479 309 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 RERGLQ9H628 205 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 SLC17A5Q9NRA2 495 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 FAM118AQ9NWS6 357 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 SMPD3Q9NY59 655 aaPredicted RBP13.55□□□□□ -0.24
PDGFB-202ENST00000381551 NDRG3Q9UGV2 375 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 COA3Q9Y2R0 106 aaPredicted RBP13.55□□□□□ -0.24
PDGFB-202ENST00000381551 FKBP7Q9Y680 259 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 ICE1Q9Y2F5 2266 aa13.55□□□□□ -0.24
PDGFB-202ENST00000381551 IGLV1-36A0A0B4J1U3 117 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 SLC16A6O15403 523 aa13.54□□□□□ -0.24
PDGFB-202ENST00000381551 SEC14L2O76054 403 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms