RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 TMPRSS13Q9BYE2 586 aa13.65□□□□□ -0.22
VCX3A-201ENST00000381089 SAP30LQ9HAJ7 183 aa13.65□□□□□ -0.22
VCX3A-201ENST00000381089 TMEM38BQ9NVV0 291 aa13.65□□□□□ -0.22
VCX3A-201ENST00000381089 CORO2BQ9UQ03 480 aa13.65□□□□□ -0.22
VCX3A-201ENST00000381089 WNK2Q9Y3S1 2297 aa13.65□□□□□ -0.22
VCX3A-201ENST00000381089 RNF13O43567 381 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 SNAP29O95721 258 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 AVPP01185 164 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 IGHV2-5P01817 119 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 CDH12P55289 794 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 FOXL1Q12952 345 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 FAM209AQ5JX71 171 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 NHLRC1Q6VVB1 395 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 USP51Q70EK9 711 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 SLC16A14Q7RTX9 510 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 ARMC8Q8IUR7 673 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 CPEB3Q8NE35 698 aaKnown RBP13.64□□□□□ -0.23
VCX3A-201ENST00000381089 ELMOD3Q96FG2 381 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 SLC25A44Q96H78 314 aaPredicted RBP13.64□□□□□ -0.23
VCX3A-201ENST00000381089 OR51B6Q9H340 312 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 WIPI2Q9Y4P8 454 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 MEGF8Q7Z7M0 2845 aa13.64□□□□□ -0.23
VCX3A-201ENST00000381089 LRRN3E7EW58 273 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 DHHO43323 396 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 TPST1O60507 370 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 DEAF1O75398 565 aaPredicted RBP13.63□□□□□ -0.23
VCX3A-201ENST00000381089 HIST1H2ABP04908 130 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 ADRA2CP18825 462 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 APLNRP35414 380 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 ZNF84P51523 738 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 UCP2P55851 309 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 SLC3A1Q07837 685 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 SCARB2Q14108 478 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 NRN1LQ496H8 165 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 PRR31Q5SQ13 230 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 ZNF613Q6PF04 617 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 SHISA2Q6UWI4 295 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 UNQ6126/PRO20091Q6UXV3 157 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 HIST3H2AQ7L7L0 130 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 COMTD1Q86VU5 262 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 RBM15BQ8NDT2 890 aaKnown RBP13.63□□□□□ -0.23
VCX3A-201ENST00000381089 C10orf82Q8WW14 230 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 HIST1H2ACQ93077 130 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 SH3GL3Q99963 347 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 GAL3ST1Q99999 423 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 KCNN2Q9H2S1 579 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 C7orf69Q9H7B7 122 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 NANSQ9NR45 359 aa13.63□□□□□ -0.23
VCX3A-201ENST00000381089 PLSCR5A0PG75 271 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 EVPLLA8MZ36 301 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 MGRN1O60291 552 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 FMO6PO60774 539 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 PRSS23O95084 383 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 IGHG1P01857 330 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 CCL2P13500 99 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 CLRN1P58418 232 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 UBA52P62987 128 aaKnown RBP13.62□□□□□ -0.23
VCX3A-201ENST00000381089 HSF2Q03933 536 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 ZP4Q12836 540 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 TSTQ16762 297 aaKnown RBP13.62□□□□□ -0.23
VCX3A-201ENST00000381089 LRIF1Q5T3J3 769 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 WDR88Q6ZMY6 472 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 WDFY1Q8IWB7 410 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 PAQR4Q8N4S7 273 aaPredicted RBP13.62□□□□□ -0.23
VCX3A-201ENST00000381089 OR4K5Q8NGD3 323 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 FGFBP3Q8TAT2 258 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 ST7LQ8TDW4 575 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 TSPAN32Q96QS1 320 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 ZNF747Q9BV97 191 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 EGLN1Q9GZT9 426 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 TMEM38AQ9H6F2 299 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 ZNF696Q9H7X3 374 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 ANGPT4Q9Y264 503 aa13.62□□□□□ -0.23
VCX3A-201ENST00000381089 ISPDA4D126 451 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 KCNAB3O43448 404 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 CHP2O43745 196 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 SHOX2O60902 331 aaPredicted RBP13.61□□□□□ -0.23
VCX3A-201ENST00000381089 QDPRP09417 244 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 HOXB9P17482 250 aaPredicted RBP13.61□□□□□ -0.23
VCX3A-201ENST00000381089 AQP1P29972 269 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 GCH1P30793 250 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 ZNF81P51508 661 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 ERVS71-1P61550 626 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 TTC33Q6PID6 262 aaPredicted RBP13.61□□□□□ -0.23
VCX3A-201ENST00000381089 LRFN4Q6PJG9 635 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 HDDC2Q7Z4H3 204 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 ZDHHC22Q8N966 263 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 HIPK4Q8NE63 616 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 OR1J1Q8NGS3 322 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 STON2Q8WXE9 905 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 CCL17Q92583 94 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 MCHR1Q99705 422 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 ZMAT3Q9HA38 289 aaKnown RBP13.61□□□□□ -0.23
VCX3A-201ENST00000381089 SLC25A37Q9NYZ2 338 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 ZNF229Q9UJW7 825 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 TRIM33Q9UPN9 1127 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 PCDHGB1Q9Y5G3 927 aa13.61□□□□□ -0.23
VCX3A-201ENST00000381089 SNX3O60493 162 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 MFN2O95140 757 aa13.6□□□□□ -0.23
VCX3A-201ENST00000381089 CH25HO95992 272 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms