RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 CMTM4Q8IZR5 234 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 PRSS35Q8N3Z0 413 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 DNAAF1Q8NEP3 725 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 OR2I1PQ8NGU4 316 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 OR5AK2Q8NH90 309 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 ZNF417Q8TAU3 575 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 ZNF671Q8TAW3 534 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 METTL21AQ8WXB1 218 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 PPP1R14AQ96A00 147 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 C8orf44Q96CB5 159 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 MRPL48Q96GC5 212 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 RNF170Q96K19 258 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 ARL5BQ96KC2 179 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 ZNF587Q96SQ5 575 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 SUSD2Q9UGT4 822 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 SPATA2Q9UM82 520 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 IFITM5A6NNB3 132 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 SHISA8B8ZZ34 492 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 SCRG1O75711 98 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 PDGFBP01127 241 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 TACSTD2P09758 323 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 ANKRD34CP0C6C1 535 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 TRAPPC2P0DI81 140 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 TRAPPC2BP0DI82 140 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 ARSBP15848 533 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 CTLA4P16410 223 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 HAAOP46952 286 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 RELQ04864 619 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 MEP1BQ16820 701 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 STAC2Q6ZMT1 411 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 GRINAQ7Z429 371 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 FAM220AQ7Z4H9 259 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 ZNF519Q8TB69 540 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 SAP25Q8TEE9 199 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 INTS14Q96SY0 518 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 WDR77Q9BQA1 342 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 AUNIPQ9H7T9 357 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 MOV10Q9HCE1 1003 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 MED11Q9P086 117 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 SRPK3Q9UPE1 567 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 B9D1Q9UPM9 204 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 CACNG2Q9Y698 323 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 PRSS37A4D1T9 235 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 OR4C45A6NMZ5 311 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 CENPXA8MT69 81 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 A8MVM7 634 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 INMT-MINDY4F8WBC2 141 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 ZNF593O00488 134 aaPredicted RBP7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 PLPP3O14495 311 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 XKRYO14609 159 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 SLC16A7O60669 478 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 ALOX12BO75342 701 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 DXOO77932 396 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 UBL3O95164 117 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 WNT11O96014 354 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 HLA-DQA2P01906 255 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 DPP4P27487 766 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 MMP15P51511 669 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 RPL27P61353 136 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 RPS15P62841 145 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 HLA-BQ31612 363 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 ARSKQ6UWY0 536 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 LRRN1Q6UXK5 716 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 ZNF600Q6ZNG1 722 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 KCTD20Q7Z5Y7 419 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 RABEPKQ7Z6M1 372 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 SIAH3Q8IW03 269 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 OR2G2Q8NGZ5 317 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 OTOSQ8NHW6 89 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 SLC25A38Q96DW6 304 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 KLHL15Q96M94 604 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 LIN7BQ9HAP6 207 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 MRPL22Q9NWU5 206 aaKnown RBP7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 ZNF69Q9UC07 566 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 VDAC3Q9Y277 283 aa7.17□□□□□ -1.26
PDLIM5-204ENST00000380176 TRAV6A0A075B6T7 132 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 TRAV8-7A0A075B6U6 113 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 TRBV11-1A0A0K0K1C0 115 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 FTCDNL1E5RQL4 147 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 AIPO00170 330 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 TOX3O15405 576 aaPredicted RBP7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 RAD1O60671 282 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 MPZL1O95297 269 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 MT-ATP6P00846 226 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 PTHLHP12272 177 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 RAC2P15153 192 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 KIR3DL2P43630 455 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 ACY1Q03154 408 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 NR0B2Q15466 257 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 NTRK2Q16620 822 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 Q499Y3 187 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 PAPD4Q6PIY7 484 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 FCRLAQ7L513 359 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 MDGA2Q7Z553 956 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 OR8K3Q8NH51 312 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 NSMAFQ92636 917 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 CCDC74BQ96LY2 380 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 OR2B2Q9GZK3 357 aa7.16□□□□□ -1.26
PDLIM5-204ENST00000380176 MCUBQ9NWR8 336 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms