RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 MGRN1O60291 552 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 WNT11O96014 354 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 HRGP04196 525 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 NOS3P29474 1203 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 HOXC12P31275 282 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 UBE2NP61088 152 aaKnown RBP16.38■□□□□ 0.21
SSU72-203ENST00000378725 LCN6P62502 163 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 TLE4Q04727 773 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 BEX5Q5H9J7 111 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 KDM4DQ6B0I6 523 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 FOXL2NBQ6ZUU3 175 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 PARP8Q8N3A8 854 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 SLC22A24Q8N4F4 322 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 OR2T33Q8NG76 320 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 OR4Q3Q8NH05 313 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 OR4K13Q8NH42 304 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 DDOQ99489 341 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 OSBPL10Q9BXB5 764 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 PAPOLBQ9NRJ5 636 aaKnown RBP16.38■□□□□ 0.21
SSU72-203ENST00000378725 NPAP1Q9NZP6 1156 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 H3BN98 237 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 SEC14L2O76054 403 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 OR8G3PP0DMU2 310 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 B4GALT1P15291 398 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 GIPRP48546 466 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 MRPS34P82930 218 aaKnown RBP16.37■□□□□ 0.21
SSU72-203ENST00000378725 CDK5Q00535 292 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 SLC35F1Q5T1Q4 408 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 NCMAPQ5T1S8 102 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 KLHL24Q6TFL4 600 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 FAM169BQ8N8A8 192 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 NPEPL1Q8NDH3 523 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 TEX47Q8TBZ9 253 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 NSMAFQ92636 917 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 NMNAT3Q96T66 252 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 SYT4Q9H2B2 425 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 B3GNT2Q9NY97 397 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 ZNF224Q9NZL3 707 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 KIF17Q9P2E2 1029 aa16.37■□□□□ 0.21
SSU72-203ENST00000378725 CRNNQ9UBG3 495 aaPredicted RBP16.37■□□□□ 0.21
SSU72-203ENST00000378725 HECTD1Q9ULT8 2610 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.36■□□□□ 0.21
SSU72-203ENST00000378725 DPRXA6NFQ7 191 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 NPR2P20594 1047 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 NR1H2P55055 460 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 PPP2R2BQ00005 443 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.36■□□□□ 0.21
SSU72-203ENST00000378725 ETFDHQ16134 617 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 C3orf36Q3SXR2 165 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 ALKBH2Q6NS38 261 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 LEG1Q6P5S2 330 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 JAZF1Q86VZ6 243 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 SKA3Q8IX90 412 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 PQLC1Q8N2U9 271 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 ICA1LQ8NDH6 482 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 OR52E2Q8NGJ4 325 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 STMN2Q93045 179 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 NABP1Q96AH0 204 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 PLPPR2Q96GM1 343 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 NUAK2Q9H093 628 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 SIAEQ9HAT2 523 aa16.36■□□□□ 0.21
SSU72-203ENST00000378725 MOV10Q9HCE1 1003 aaKnown RBP16.36■□□□□ 0.21
SSU72-203ENST00000378725 OR6C68A6NDL8 312 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 ZNF503-AS2A6NEH8 195 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 SAC3D1A6NKF1 404 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 SLC16A7O60669 478 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 KHDRBS3O75525 346 aaKnown RBP16.35■□□□□ 0.21
SSU72-203ENST00000378725 RENP00797 406 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 CBR1P16152 277 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 CTLA4P16410 223 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 POU1F1P28069 291 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 CRABP1P29762 137 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 CDAP32320 146 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 GRK5P34947 590 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 CRISP1P54107 249 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 ESRRGP62508 458 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 GINS1Q14691 196 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 PGGHGQ32M88 737 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 FAM27BQ5VT28 67 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 ACSM5Q6NUN0 579 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 SLC27A4Q6P1M0 643 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 PIK3IP1Q96FE7 263 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 TMEM204Q9BSN7 226 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 C1QTNF6Q9BXI9 259 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 ESRP2Q9H6T0 727 aaKnown RBP16.35■□□□□ 0.21
SSU72-203ENST00000378725 KRT84Q9NSB2 600 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 TMEFF2Q9UIK5 374 aaPredicted RBP16.35■□□□□ 0.21
SSU72-203ENST00000378725 KLHL21Q9UJP4 597 aa16.35■□□□□ 0.21
SSU72-203ENST00000378725 ASH1LQ9NR48 2969 aaKnown RBP16.35■□□□□ 0.21
SSU72-203ENST00000378725 MITFO75030 526 aaPredicted RBP16.34■□□□□ 0.21
SSU72-203ENST00000378725 FARS2O95363 451 aaKnown RBP16.34■□□□□ 0.21
SSU72-203ENST00000378725 IGKV3-15P01624 115 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 IGLV1-44P01699 117 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 HLA-HP01893 362 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 ZNF83P51522 516 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 TUBA1BP68363 451 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 TUBA4AP68366 448 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 TUBA1AQ71U36 451 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 DPPA2Q7Z7J5 298 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 ZBTB46Q86UZ6 589 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms