RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 TMEM27Q9HBJ8 222 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 SIGLEC7Q9Y286 467 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 OR6C70A6NIJ9 312 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 A8MV72 311 aaPredicted RBP11.12□□□□□ -0.63
VRK3-202ENST00000377011 KLRC4-KLRK1H3BQV0 150 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 ADAM10O14672 748 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 CDC40O60508 579 aaKnown RBP eCLIP11.12□□□□□ -0.63
VRK3-202ENST00000377011 ZG16O60844 167 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 TMEM127O75204 238 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 SC5DO75845 299 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 NTN1O95631 604 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 SERPINA3P01011 423 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 IFNGP01579 166 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 PSKH1P11801 424 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 ZNF3P17036 446 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 PRKCAP17252 672 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 NPR2P20594 1047 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 MAKP20794 623 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 DRD5P21918 477 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 SLC2A5P22732 501 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 PPIAP62937 165 aaKnown RBP11.12□□□□□ -0.63
VRK3-202ENST00000377011 POU6F2P78424 691 aaPredicted RBP11.12□□□□□ -0.63
VRK3-202ENST00000377011 PSG6Q00889 435 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 P2RY14Q15391 338 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 MAPK14Q16539 360 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 HSD17B12Q53GQ0 312 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 BAIAP2L2Q6UXY1 529 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 CREB3L2Q70SY1 520 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 PXKQ7Z7A4 578 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 OAFQ86UD1 273 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 YIPF7Q8N8F6 280 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 SLC37A3Q8NCC5 494 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 ANGPTL6Q8NI99 470 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 NTNG2Q96CW9 530 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 BPIFA2Q96DR5 249 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 OMA1Q96E52 524 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 FYTTD1Q96QD9 318 aaKnown RBP11.12□□□□□ -0.63
VRK3-202ENST00000377011 ZNF426Q9BUY5 554 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 RTN4RQ9BZR6 473 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 GALNT9Q9HCQ5 603 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 EXTL2Q9UBQ6 330 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 ZNF835Q9Y2P0 537 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 ALG5Q9Y673 324 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 MAST4O15021 2626 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 TRAV1-2A0A0B4J238 106 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 A0A0B4J2E0 115 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 TRGV8A0A0C4DH27 118 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 A0A1B0GX12 115 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 PTP4A3O75365 173 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 NKX2-2O95096 273 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 SBK2P0C263 348 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 HK1P19367 917 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 ELK1P19419 428 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 SLC6A6P31641 620 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 NRG3P56975 720 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 RRAS2P62070 204 aaPredicted RBP11.12□□□□□ -0.63
VRK3-202ENST00000377011 CD83Q01151 205 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 MAB21L1Q13394 359 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 EMC4Q5J8M3 183 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 SLC22A10Q63ZE4 541 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 PYHIN1Q6K0P9 492 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 WDR88Q6ZMY6 472 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 CDH24Q86UP0 819 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 TMEM99Q8N816 258 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 SSC4DQ8WTU2 575 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 RFT1Q96AA3 541 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 LCORQ96JN0 433 aaPredicted RBP11.12□□□□□ -0.63
VRK3-202ENST00000377011 SGCZQ96LD1 299 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 TEAD3Q99594 435 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 IFT27Q9BW83 186 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 TRIM2Q9C040 744 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 ISG20L2Q9H9L3 353 aaKnown RBP11.12□□□□□ -0.63
VRK3-202ENST00000377011 SLC5A6Q9Y289 635 aa11.12□□□□□ -0.63
VRK3-202ENST00000377011 NCOA6Q14686 2063 aaPredicted RBP11.11□□□□□ -0.63
VRK3-202ENST00000377011 KIAA1549Q9HCM3 1950 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 FBN2P35556 2912 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 GXYLT2A0PJZ3 443 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 SMIM30A4D0T7 59 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 FAM183AA6NL82 134 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 NOTOA8MTQ0 251 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 ZNF780AO75290 641 aaPredicted RBP11.11□□□□□ -0.63
VRK3-202ENST00000377011 NCR1O76036 304 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 P04436 131 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 PEPDP12955 493 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 PRG2P13727 222 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 SLC6A1P30531 599 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 THBS2P35442 1172 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 PPICP45877 212 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 PITPNBP48739 271 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 ACTA2P62736 377 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 ACTG2P63267 376 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 PLGLB1Q02325 96 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 MRPL28Q13084 256 aaKnown RBP11.11□□□□□ -0.63
VRK3-202ENST00000377011 EFR3AQ14156 821 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 C4orf17Q53FE4 359 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 IDNKQ5T6J7 187 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 HLA-DQA1Q5Y7H0 255 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 DMKNQ6E0U4 476 aaPredicted RBP11.11□□□□□ -0.63
VRK3-202ENST00000377011 SFXN4Q6P4A7 337 aa11.11□□□□□ -0.63
VRK3-202ENST00000377011 LSRQ86X29 649 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms