RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 RIMS3Q9UJD0 308 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 ZNF346Q9UL40 294 aaKnown RBP18.07■□□□□ 0.48
VSX1-201ENST00000376707 AP3M1Q9Y2T2 418 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 SLC22A23A1A5C7 686 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 HPXP02790 462 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 F13BP05160 661 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 FUT1P19526 365 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 CDH15P55291 814 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 SELENOVP59797 346 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 RPL18Q07020 188 aaKnown RBP18.06■□□□□ 0.48
VSX1-201ENST00000376707 PIN1Q13526 163 aaPredicted RBP18.06■□□□□ 0.48
VSX1-201ENST00000376707 RGS7BPQ6MZT1 257 aaPredicted RBP18.06■□□□□ 0.48
VSX1-201ENST00000376707 HDDC2Q7Z4H3 204 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 NKAIN4Q8IVV8 208 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 NOXO1Q8NFA2 376 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 PFN4Q8NHR9 129 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 LIPHQ8WWY8 451 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 RDH5Q92781 318 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 MCHR2Q969V1 340 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 RCN3Q96D15 328 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 ZNF347Q96SE7 839 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 TMEFF2Q9UIK5 374 aaPredicted RBP18.06■□□□□ 0.48
VSX1-201ENST00000376707 SVEP1Q4LDE5 3571 aa18.06■□□□□ 0.48
VSX1-201ENST00000376707 ELOVL7A1L3X0 281 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 SHOX2O60902 331 aaPredicted RBP18.05■□□□□ 0.48
VSX1-201ENST00000376707 OR7A10O76100 309 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 PTHP01270 115 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 TSPAN19P0C672 248 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 FAM157BP0CG42 384 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 NAT2P11245 290 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 CCL2P13500 99 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 GPR6P46095 362 aaPredicted RBP18.05■□□□□ 0.48
VSX1-201ENST00000376707 OR1E2P47887 323 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 DAP3P51398 398 aaKnown RBP18.05■□□□□ 0.48
VSX1-201ENST00000376707 UGT2B15P54855 530 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 MYBPC1Q00872 1141 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 SRSF2Q01130 221 aaKnown RBP18.05■□□□□ 0.48
VSX1-201ENST00000376707 PLP2Q04941 152 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 RUNX1T1Q06455 604 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 HIST3H3Q16695 136 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 NKPD1Q17RQ9 610 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 TBC1D28Q2M2D7 210 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 NRN1LQ496H8 165 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 ARPINQ7Z6K5 226 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 MICU2Q8IYU8 434 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 SYT14Q8NB59 555 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 TMEM255BQ8WV15 326 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 TMEM239Q8WW34 195 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 SGTBQ96EQ0 304 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 SEPHS2Q99611 448 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 INIPQ9NRY2 104 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 CMTM6Q9NX76 183 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 GPR160Q9UJ42 338 aa18.05■□□□□ 0.48
VSX1-201ENST00000376707 IQCMA0A1B0GVH7 501 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 CENPBD1B2RD01 187 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 ACADSP16219 412 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 ACHEP22303 614 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 COL8A2P25067 703 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 SRP14P37108 136 aaKnown RBP18.04■□□□□ 0.48
VSX1-201ENST00000376707 AQP2P41181 271 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 SELENOWP63302 87 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 LRRC23Q53EV4 343 aaPredicted RBP18.04■□□□□ 0.48
VSX1-201ENST00000376707 PAQR4Q8N4S7 273 aaPredicted RBP18.04■□□□□ 0.48
VSX1-201ENST00000376707 POU5F2Q8N7G0 328 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 RBM15BQ8NDT2 890 aaKnown RBP18.04■□□□□ 0.48
VSX1-201ENST00000376707 OR1J2Q8NGS2 313 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 ASB10Q8WXI3 467 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 C1orf159Q96HA4 380 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 C19orf24Q9BVV8 132 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 MRPL13Q9BYD1 178 aaKnown RBP18.04■□□□□ 0.48
VSX1-201ENST00000376707 LRMDAQ9H2I8 198 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 OR51B6Q9H340 312 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 C20orf141Q9NUB4 165 aa18.04■□□□□ 0.48
VSX1-201ENST00000376707 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.04■□□□□ 0.48
VSX1-201ENST00000376707 CCDC22O60826 627 aa18.03■□□□□ 0.48
VSX1-201ENST00000376707 TRMUO75648 421 aaKnown RBP18.03■□□□□ 0.48
VSX1-201ENST00000376707 LCKP06239 509 aa18.03■□□□□ 0.48
VSX1-201ENST00000376707 COX4I1P13073 169 aa18.03■□□□□ 0.48
VSX1-201ENST00000376707 PCMT1P22061 227 aa18.03■□□□□ 0.48
VSX1-201ENST00000376707 KLF3P57682 345 aaPredicted RBP18.03■□□□□ 0.48
VSX1-201ENST00000376707 ALKBH6Q3KRA9 238 aa18.03■□□□□ 0.48
VSX1-201ENST00000376707 LIPNQ5VXI9 398 aa18.03■□□□□ 0.48
VSX1-201ENST00000376707 SLC15A3Q8IY34 581 aa18.03■□□□□ 0.48
VSX1-201ENST00000376707 LRRC18Q8N456 261 aa18.03■□□□□ 0.48
VSX1-201ENST00000376707 KCNN2Q9H2S1 579 aa18.03■□□□□ 0.48
VSX1-201ENST00000376707 NARFLQ9H6Q4 476 aa18.03■□□□□ 0.48
VSX1-201ENST00000376707 TAAR3PQ9P1P4 343 aa18.03■□□□□ 0.48
VSX1-201ENST00000376707 STX18Q9P2W9 335 aaKnown RBP18.03■□□□□ 0.48
VSX1-201ENST00000376707 MED31Q9Y3C7 131 aa18.03■□□□□ 0.48
VSX1-201ENST00000376707 HTR3EA5X5Y0 456 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 B4DSR2 109 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 SNAP29O95721 258 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 CLPTM1O96005 669 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 SAGP10523 405 aaPredicted RBP18.02■□□□□ 0.48
VSX1-201ENST00000376707 RAD52P43351 418 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 DVL1P1P54792 670 aaPredicted RBP18.02■□□□□ 0.48
VSX1-201ENST00000376707 TMEM33P57088 247 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 MRPS11P82912 194 aaKnown RBP18.02■□□□□ 0.48
VSX1-201ENST00000376707 HSF2Q03933 536 aa18.02■□□□□ 0.48
VSX1-201ENST00000376707 C8orf82Q6P1X6 216 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms