RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 CSPG4Q6UVK1 2322 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 IGKV1D-43A0A0B4J1Z2 117 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 A0A1W2PRQ8 180 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 NPIPB13A6NJU9 1138 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 B9A039 149 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 NPIPB4C9JG80 1138 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 ARPC2O15144 300 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 FARS2O95363 451 aaKnown RBP12.33□□□□□ -0.44
CLCN6-203ENST00000376490 HEXAP06865 529 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 ZNF35P13682 527 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 ZNF26P17031 533 aaPredicted RBP12.33□□□□□ -0.44
CLCN6-203ENST00000376490 NPR2P20594 1047 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 NR4A1P22736 598 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 CDAP32320 146 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 SLC9A3P48764 834 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 ZNF133P52736 654 aaPredicted RBP12.33□□□□□ -0.44
CLCN6-203ENST00000376490 CD47Q08722 323 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 DAG1Q14118 895 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 DGCR6Q14129 220 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 TAF11Q15544 211 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 ANKDD1AQ495B1 522 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 ZBED5Q49AG3 693 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 FGD3Q5JSP0 725 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 C10orf128Q5T292 105 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 HDDC2Q7Z4H3 204 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 ZNF584Q8IVC4 421 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 LRRC18Q8N456 261 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 OR52J3Q8NH60 311 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 NSMAFQ92636 917 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 FAM46AQ96IP4 442 aaKnown RBP12.33□□□□□ -0.44
CLCN6-203ENST00000376490 TSPAN32Q96QS1 320 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 VRK1Q99986 396 aaPredicted RBP12.33□□□□□ -0.44
CLCN6-203ENST00000376490 RNF121Q9H920 327 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 STX18Q9P2W9 335 aaKnown RBP12.33□□□□□ -0.44
CLCN6-203ENST00000376490 MAGEL2Q9UJ55 1249 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 UGT2A1Q9Y4X1 527 aa12.33□□□□□ -0.44
CLCN6-203ENST00000376490 ABCA1O95477 2261 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 TLN2Q9Y4G6 2542 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 TRBV4-1A0A0J9YWV2 114 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 TMEM129A0AVI4 362 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 FAM171A2A8MVW0 826 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 VSTM5A8MXK1 200 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 PTP4A3O75365 173 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 PDE5AO76074 875 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 F12P00748 615 aaPredicted RBP12.32□□□□□ -0.44
CLCN6-203ENST00000376490 IGHMP01871 453 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 SEMG1P04279 462 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 SERPINA5P05154 406 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 HOXB4P17483 251 aaPredicted RBP12.32□□□□□ -0.44
CLCN6-203ENST00000376490 MNAT1P51948 309 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 EFNA4P52798 201 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 SNRPD2P62316 118 aaKnown RBP12.32□□□□□ -0.44
CLCN6-203ENST00000376490 ERVK-25P63136 954 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 SNTB2Q13425 540 aaKnown RBP12.32□□□□□ -0.44
CLCN6-203ENST00000376490 SEC23BQ15437 767 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 EFNB3Q15768 340 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 SGCAQ16586 387 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 SLC25A47Q6Q0C1 308 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 SLC16A14Q7RTX9 510 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 ZNF525Q8N782 197 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 CCDC197Q8NCU1 140 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 ZNF519Q8TB69 540 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 NSMCE2Q96MF7 247 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 RBP7Q96R05 134 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 DOK1Q99704 481 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 RHNO1Q9BSD3 238 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 PLK3Q9H4B4 646 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 ZNF442Q9H7R0 627 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 NDE1Q9NXR1 346 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 FAM53CQ9NYF3 392 aa12.32□□□□□ -0.44
CLCN6-203ENST00000376490 IGHV4-30-2A0A087WSY4 118 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 SH3PXD2BA1X283 911 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 GPRIN2O60269 458 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 ENTPD5O75356 428 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 T-ENOLP0DO92 83 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 CCL2P13500 99 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 ITGA2P17301 1181 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 RPL4P36578 427 aaKnown RBP12.31□□□□□ -0.44
CLCN6-203ENST00000376490 OMPP47874 163 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 MRPS34P82930 218 aaKnown RBP12.31□□□□□ -0.44
CLCN6-203ENST00000376490 MSMPQ1L6U9 139 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 SLC36A2Q495M3 483 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 NRN1LQ496H8 165 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 THEM4Q5T1C6 240 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 TMEM53Q6P2H8 277 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 RINLQ6ZS11 566 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 ZCCHC24Q8N2G6 241 aaKnown RBP12.31□□□□□ -0.44
CLCN6-203ENST00000376490 SVOPLQ8N434 492 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 ARIH2OSQ8N7S6 290 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 OR10H5Q8NGA6 315 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 NABP1Q96AH0 204 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 DHRS1Q96LJ7 313 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 SORCS2Q96PQ0 1159 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 FUZQ9BT04 418 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 ALG12Q9BV10 488 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 SIAEQ9HAT2 523 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 SMURF2Q9HAU4 748 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 ADAM21Q9UKJ8 722 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 FBXL3Q9UKT7 428 aa12.31□□□□□ -0.44
CLCN6-203ENST00000376490 TMEM5Q9Y2B1 443 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms