RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 PRSS45Q7RTY3 260 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 LRRC28Q86X40 367 aaPredicted RBP12.65□□□□□ -0.38
MSH5-202ENST00000375740 TOMM5Q8N4H5 51 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 EXD3Q8N9H8 876 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 ADAMTS14Q8WXS8 1223 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 ATOH1Q92858 354 aaPredicted RBP12.65□□□□□ -0.38
MSH5-202ENST00000375740 HIST1H2ACQ93077 130 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 YIPF5Q969M3 257 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 KCTD12Q96CX2 325 aaKnown RBP12.65□□□□□ -0.38
MSH5-202ENST00000375740 ELMOD3Q96FG2 381 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 GRHPRQ9UBQ7 328 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 A0A0C4DFX4 3053 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 ADAMTS20P59510 1910 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 PCNX3Q9H6A9 2034 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 TRIOBPQ9H2D6 2365 aa12.65□□□□□ -0.39
MSH5-202ENST00000375740 A0A1W2PQD3 144 aa12.65□□□□□ -0.39
MSH5-202ENST00000375740 CPED1A4D0V7 1026 aa12.65□□□□□ -0.39
MSH5-202ENST00000375740 FAM74A7A6NL05 159 aa12.65□□□□□ -0.39
MSH5-202ENST00000375740 EIF4E2O60573 245 aaKnown RBP12.65□□□□□ -0.39
MSH5-202ENST00000375740 SERPINA3P01011 423 aa12.65□□□□□ -0.39
MSH5-202ENST00000375740 SLC25A1P53007 311 aa12.65□□□□□ -0.39
MSH5-202ENST00000375740 RPS11P62280 158 aaKnown RBP eCLIP12.65□□□□□ -0.39
MSH5-202ENST00000375740 FAM74A3Q4VXF1 159 aa12.65□□□□□ -0.39
MSH5-202ENST00000375740 SFRP4Q6FHJ7 346 aaPredicted RBP12.65□□□□□ -0.39
MSH5-202ENST00000375740 TMEM71Q6P5X7 295 aa12.65□□□□□ -0.39
MSH5-202ENST00000375740 SYT9Q86SS6 491 aa12.65□□□□□ -0.39
MSH5-202ENST00000375740 ZNF441Q8N8Z8 693 aa12.65□□□□□ -0.39
MSH5-202ENST00000375740 UXS1Q8NBZ7 420 aa12.65□□□□□ -0.39
MSH5-202ENST00000375740 PDCD1LG2Q9BQ51 273 aa12.65□□□□□ -0.39
MSH5-202ENST00000375740 GPR160Q9UJ42 338 aa12.65□□□□□ -0.39
MSH5-202ENST00000375740 PRR32B1ATL7 298 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 H7C1C5 153 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 DNASE2O00115 360 aaPredicted RBP12.64□□□□□ -0.39
MSH5-202ENST00000375740 TXNDC12O95881 172 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 APOC3P02656 99 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 RAB3BP20337 219 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 DHPSP49366 369 aaPredicted RBP12.64□□□□□ -0.39
MSH5-202ENST00000375740 LCN6P62502 163 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 ZNF169Q14929 603 aaPredicted RBP12.64□□□□□ -0.39
MSH5-202ENST00000375740 STT3BQ8TCJ2 826 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 TSPAN32Q96QS1 320 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 MESP1Q9BRJ9 268 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 CA10Q9NS85 328 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 RXFP3Q9NSD7 469 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 DCTN6O00399 190 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 PDCD5O14737 125 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 AKR1D1P51857 326 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 MELKQ14680 651 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 C16orf47Q6ZP98 133 aaPredicted RBP12.64□□□□□ -0.39
MSH5-202ENST00000375740 SLC38A9Q8NBW4 561 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 UQCC2Q9BRT2 126 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 NPTNQ9Y639 398 aa12.64□□□□□ -0.39
MSH5-202ENST00000375740 TRAV1-2A0A0B4J238 106 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 OR6C76A6NM76 312 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 ANXA2P2A6NMY6 339 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 FADS1O60427 444 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 FZD7O75084 574 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 BGLAPP02818 100 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 GP1BBP13224 206 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 PGCP20142 388 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 MESTQ5EB52 335 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 TMEM255AQ5JRV8 349 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 NUP54Q7Z3B4 507 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 OR4D9Q8NGE8 314 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 TRMT10AQ8TBZ6 339 aaKnown RBP12.63□□□□□ -0.39
MSH5-202ENST00000375740 MRPL48Q96GC5 212 aaKnown RBP12.63□□□□□ -0.39
MSH5-202ENST00000375740 ADAD1Q96M93 576 aaKnown RBP12.63□□□□□ -0.39
MSH5-202ENST00000375740 OR14A2Q96R54 314 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 CDX2Q99626 313 aaPredicted RBP12.63□□□□□ -0.39
MSH5-202ENST00000375740 IFT22Q9H7X7 185 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 FKRPQ9H9S5 495 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 HPF1Q9NWY4 346 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 MOKQ9UQ07 419 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 GMDSO60547 372 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 CD1AP06126 327 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 RAB3AP20336 220 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 NPR2P20594 1047 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 ZNF684Q5T5D7 378 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 RHBDD2Q6NTF9 364 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 GUSBP11Q6P575 273 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 SLC16A9Q7RTY1 509 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 BVESQ8NE79 360 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 GCDHQ92947 438 aaPredicted RBP12.63□□□□□ -0.39
MSH5-202ENST00000375740 SYNDIG1Q9H7V2 258 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 FSCN3Q9NQT6 498 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 TAS2R5Q9NYW4 299 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 SRPK3Q9UPE1 567 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 NPFFR2Q9Y5X5 522 aa12.63□□□□□ -0.39
MSH5-202ENST00000375740 TRAV36DV7A0A075B6V5 113 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 TMEM72A0PK05 275 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 TVP23AA6NH52 213 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 KRBOX1C9JBD0 128 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 CDC40O60508 579 aaKnown RBP eCLIP12.62□□□□□ -0.39
MSH5-202ENST00000375740 ARL6IP5O75915 188 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 UCHL1P09936 223 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 RBMS1P29558 406 aaKnown RBP12.62□□□□□ -0.39
MSH5-202ENST00000375740 RNF4P78317 190 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 CBFBQ13951 182 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 EMC4Q5J8M3 183 aa12.62□□□□□ -0.39
MSH5-202ENST00000375740 LYSMD4Q5XG99 296 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms