RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 GPNMBQ14956 572 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 RAB30Q15771 203 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF79Q15937 498 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF595Q8IYB9 648 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 LINC01555Q8NAE3 123 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 SPPL3Q8TCT6 385 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 MRGPRX3Q96LB0 322 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 SPACA5Q96QH8 159 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 PBDC1Q9BVG4 233 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 OR11A1Q9GZK7 315 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 LYRM4Q9HD34 91 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 ATPIF1Q9UII2 106 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 OR52A1Q9UKL2 312 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 MOKQ9UQ07 419 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 DICER1Q9UPY3 1922 aaKnown RBP5.98□□□□□ -1.45
SMC1A-202ENST00000375340 TRBV5-3A0A0A0MS03 114 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 SULT2B1O00204 365 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 IFNA5P01569 189 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 RFX2P48378 723 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 CHAC2Q8WUX2 184 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 HAS2Q92819 552 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 PFDN5Q99471 154 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 FBXL4Q9UKA2 621 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 SLC22A13Q9Y226 551 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 GGT3PA6NGU5 568 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 E9PI62 339 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 EIF2S3P41091 472 aaKnown RBP5.98□□□□□ -1.45
SMC1A-202ENST00000375340 FASLGP48023 281 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 CDKN3Q16667 212 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 PRTGQ2VWP7 1150 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 SLC35D3Q5M8T2 416 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 SERGEFQ9UGK8 458 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 MRPS17Q9Y2R5 130 aaKnown RBP5.98□□□□□ -1.45
SMC1A-202ENST00000375340 PYCARD-AS1I3L0S3 204 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 HCRTR1O43613 425 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 GPRIN2O60269 458 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 DNAJB6O75190 326 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 AKR7A3O95154 331 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 INHBBP09529 407 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 NAGAP17050 411 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 MSX1P28360 303 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 CASRP41180 1078 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 BAMBIQ13145 260 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 EIF4EBP2Q13542 120 aaPredicted RBP5.98□□□□□ -1.45
SMC1A-202ENST00000375340 PLPP6Q8IY26 295 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 SUMF2Q8NBJ7 301 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 TP53I13Q8NBR0 393 aaPredicted RBP5.98□□□□□ -1.45
SMC1A-202ENST00000375340 OR1J2Q8NGS2 313 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 SPTSSAQ969W0 71 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 RAB3CQ96E17 227 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 SELENOIQ9C0D9 397 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 KIAA0100Q14667 2235 aaKnown RBP5.98□□□□□ -1.45
SMC1A-202ENST00000375340 POU3F3P20264 500 aaPredicted RBP5.98□□□□□ -1.45
SMC1A-202ENST00000375340 GPR139Q6DWJ6 353 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 PLXDC1Q8IUK5 500 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 CDH26Q8IXH8 852 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 WDFY2Q96P53 400 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 ISYNA1Q9NPH2 558 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 BIN3Q9NQY0 253 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 EXOGQ9Y2C4 368 aaKnown RBP5.98□□□□□ -1.45
SMC1A-202ENST00000375340 KIR2DS5A0A0G2JLQ3 304 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 A0A0G2JNG1 304 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 CIB4A0PJX0 185 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 KIR2DS3K7RE56 304 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 LANCL1O43813 399 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 LALBAP00709 142 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 CD3DP04234 171 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 KLK3P07288 261 aaPredicted RBP5.98□□□□□ -1.45
SMC1A-202ENST00000375340 NR2C1P13056 603 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 IFNGR1P15260 489 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 RPL18Q07020 188 aaKnown RBP5.98□□□□□ -1.45
SMC1A-202ENST00000375340 KIR2DS5Q14953 304 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 CDK5R1Q15078 307 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 PRAMEF20Q5VT98 475 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 PRSS41Q7RTY9 318 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 CXorf58Q96LI9 332 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 SUCNR1Q9BXA5 334 aa5.98□□□□□ -1.45
SMC1A-202ENST00000375340 SCN2AQ99250 2005 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 A0A1B0GTH9 108 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 TMEM235A6NFC5 223 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 CDC42EP2O14613 210 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 LINC01565O15544 149 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 SGCEO43556 437 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 PRAMEF4O60810 478 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 IGHG1P01857 330 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 JMJD7P0C870 316 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 ATF1P18846 271 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 IRF3Q14653 427 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 MLF2Q15773 248 aaPredicted RBP5.97□□□□□ -1.45
SMC1A-202ENST00000375340 SFRP5Q5T4F7 317 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 OR4C16Q8NGL9 310 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 RADILQ96JH8 1075 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 LRFN1Q9P244 771 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 ABI3Q9P2A4 366 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 HIF3AQ9Y2N7 669 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 IFNA2P01563 188 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 AKR1C8PQ5T2L2 129 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 MOB3CQ70IA8 216 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF547Q8IVP9 402 aa5.97□□□□□ -1.45
SMC1A-202ENST00000375340 GABRG1Q8N1C3 465 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms